RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 LINC00052Q96N35 136 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TEFMQ96QE5 360 aaKnown RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 OR4K3Q96R72 315 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 LYSMD1Q96S90 227 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 GPA33Q99795 319 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 FAM83CQ9BQN1 747 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TMEM121BQ9BXQ6 578 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 POLR2J3Q9H1A7 115 aaKnown RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 DPAGT1Q9H3H5 408 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MVB12BQ9H7P6 319 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ZFYVE1Q9HBF4 777 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MYNNQ9NPC7 610 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 GKN1Q9NS71 199 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 SEMA3GQ9NS98 782 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TAS2R7Q9NYW3 318 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 IL20Q9NYY1 176 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TVP23BQ9NYZ1 205 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ZNF224Q9NZL3 707 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 EMC3Q9P0I2 261 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MARK1Q9P0L2 795 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 EXTL2Q9UBQ6 330 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 KLF15Q9UIH9 416 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MBD1Q9UIS9 605 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 SCP2D1Q9UJQ7 156 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ING1Q9UK53 422 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ICKQ9UPZ9 632 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ENTPD4Q9Y227 616 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 SLC45A1Q9Y2W3 748 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 Q9Y3F1 56 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 PCDHB9Q9Y5E1 797 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TTC3P53804 2025 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TDRD15B5MCY1 1934 aaKnown RBP6.54□□□□□ -1.36
CPSF7-215ENST00000536145 TEX13CA0A0J9YWL9 993 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 A0A1W2PPL8 197 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 A0A1W2PRQ8 180 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 SLC22A23A1A5C7 686 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 E7EQ34 232 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 ZNF593O00488 134 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-215ENST00000536145 NPC1O15118 1278 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 KPNA5O15131 536 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 PI15O43692 258 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 TLX2O43763 284 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-215ENST00000536145 B4GALT2O60909 372 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 CLDN7O95471 211 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 WDPCPO95876 746 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 EIF4EP06730 217 aaKnown RBP6.54□□□□□ -1.36
CPSF7-215ENST00000536145 PRKACAP17612 351 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 UQCRC2P22695 453 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 MMP11P24347 488 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 DNASE1P24855 282 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 HNF1BP35680 557 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 SLC1A3P43003 542 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 SLC6A11P48066 632 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 CCT3P49368 545 aaKnown RBP6.54□□□□□ -1.36
CPSF7-215ENST00000536145 DGKGP49619 791 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 CASP9P55211 416 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 SMIM11AP58511 58 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 BDH1Q02338 343 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 RPA4Q13156 261 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 OPCMLQ14982 345 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 NTRK2Q16620 822 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 SLC5A12Q1EHB4 618 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 GSG1Q2KHT4 349 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 ZNF284Q2VY69 593 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 KLHL12Q53G59 568 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 PRAMEF19Q5SWL8 479 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 MFSD14CQ5VZR4 134 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 ZNF57Q68EA5 555 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-215ENST00000536145 RAET1GQ6H3X3 334 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 REEP3Q6NUK4 255 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 C1orf94Q6P1W5 598 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 PODNL1Q6PEZ8 512 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 BHLHB9Q6PI77 547 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 LINGO4Q6UY18 593 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 WASH2PQ6VEQ5 465 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 SLC36A4Q6YBV0 504 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 TPGS1Q6ZTW0 290 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 BTN2A1Q7KYR7 527 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 NLRC3Q7RTR2 1065 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 OTOP2Q7RTS6 562 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 DNAJB7Q7Z6W7 309 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-215ENST00000536145 ZER1Q7Z7L7 766 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 ADGRD2Q7Z7M1 963 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 OAFQ86UD1 273 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 CDH24Q86UP0 819 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 COMTD1Q86VU5 262 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 LRRC28Q86X40 367 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-215ENST00000536145 APCDD1Q8J025 514 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 TAGAPQ8N103 731 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 HORMAD2Q8N7B1 307 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 ATAD1Q8NBU5 361 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 TTC16Q8NEE8 873 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 FAM71CQ8NEG0 241 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 OR4K1Q8NGD4 311 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 OR6M1Q8NGM8 313 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 OR8D4Q8NGM9 314 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 WDR48Q8TAF3 677 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 CEP76Q8TAP6 659 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 ADAMTS19Q8TE59 1207 aa6.54□□□□□ -1.36
CPSF7-215ENST00000536145 C16orf78Q8WTQ4 265 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms