RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 FAM83HQ6ZRV2 1179 aaPredicted RBP8.57□□□□□ -1.04
SF3B2-216ENST00000534765 ABI3BPQ7Z7G0 1075 aa8.57□□□□□ -1.04
SF3B2-216ENST00000534765 DTWD1Q8N5C7 304 aa8.57□□□□□ -1.04
SF3B2-216ENST00000534765 PAPD5Q8NDF8 572 aaKnown RBP8.57□□□□□ -1.04
SF3B2-216ENST00000534765 OR5K1Q8NHB7 308 aa8.57□□□□□ -1.04
SF3B2-216ENST00000534765 UFD1Q92890 307 aa8.57□□□□□ -1.04
SF3B2-216ENST00000534765 ZNF578Q96N58 590 aaPredicted RBP8.57□□□□□ -1.04
SF3B2-216ENST00000534765 TSNAXQ99598 290 aaKnown RBP8.57□□□□□ -1.04
SF3B2-216ENST00000534765 MBNL1Q9NR56 388 aaKnown RBP8.57□□□□□ -1.04
SF3B2-216ENST00000534765 CCL27Q9Y4X3 112 aa8.57□□□□□ -1.04
SF3B2-216ENST00000534765 L7N2F9 121 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 DSCR3O14972 297 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 NPC1O15118 1278 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 TSPAN6O43657 245 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 PCDHGA12O60330 932 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 SLC22A3O75751 556 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 GATBO75879 557 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 ESR1P03372 595 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 ANXA3P12429 323 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 STOMP27105 288 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 AOAHP28039 575 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 CNTN1Q12860 1018 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 ABRAXAS2Q15018 415 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 NR6A1Q15406 480 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 TCEA2Q15560 299 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 GFOD2Q3B7J2 385 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 ARL5BQ96KC2 179 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 MBOAT4Q96T53 435 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 TREX2Q9BQ50 279 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 SLC23A2Q9UGH3 650 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 CRLS1Q9UJA2 301 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 SLCO1B1Q9Y6L6 691 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 C2orf74A8MZ97 194 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 AQP1P29972 269 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 GDI1P31150 447 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 POLR2JP52435 117 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 RUNX3Q13761 415 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 ZNF124Q15973 351 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 SYT6Q5T7P8 510 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 PIP5KL1Q5T9C9 394 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 MACC1Q6ZN28 852 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 DEF8Q6ZN54 512 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 GOLGA7Q7Z5G4 137 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 TRIM69Q86WT6 500 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 ZDHHC21Q8IVQ6 265 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 PHACTR4Q8IZ21 702 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 FBXO39Q8N4B4 442 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 OR7G3Q8NG95 312 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 RNF170Q96K19 258 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 SSX3Q99909 188 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 C7orf50Q9BRJ6 194 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 CCM2Q9BSQ5 444 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 TRPV4Q9HBA0 871 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 POPDC3Q9HBV1 291 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 SSR3Q9UNL2 185 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 NOSIPQ9Y314 301 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 PCDHGB3Q9Y5G1 929 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 NUP214P35658 2090 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 MRPS14O60783 128 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 KHDRBS3O75525 346 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 HSD17B1P14061 328 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 VIPR1P32241 457 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 TGFBR2P37173 567 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 KIR2DL1P43626 348 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 IL2P60568 153 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 ST3GAL4Q11206 333 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 HNRNPA1L2Q32P51 320 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 FNDC3BQ53EP0 1204 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 PTRHD1Q6GMV3 140 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 TMEM184AQ6ZMB5 413 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 TRILQ7L0X0 811 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 KRT78Q8N1N4 520 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 OR52H1Q8NGJ2 320 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 GANCQ8TET4 914 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 RHBDF1Q96CC6 855 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 MTFMTQ96DP5 389 aaKnown RBP8.56□□□□□ -1.04
SF3B2-216ENST00000534765 MSLNLQ96KJ4 702 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 GSX2Q9BZM3 304 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 REEP1Q9H902 201 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 ZMYM5Q9UJ78 669 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 CACNG2Q9Y698 323 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 LOC400499M0QZD8 3231 aa8.56□□□□□ -1.04
SF3B2-216ENST00000534765 ARHGEF33A8MVX0 844 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 ZNF197O14709 1029 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 CASKO14936 926 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 AZIN1O14977 448 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 BET1O15155 118 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 MID1O15344 667 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 FFAR2O15552 330 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 UGT2B17O75795 530 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 NR2C1P13056 603 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 APEHP13798 732 aaKnown RBP8.55□□□□□ -1.04
SF3B2-216ENST00000534765 PCMT1P22061 227 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 GPX3P22352 226 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 PSMA1P25786 263 aaKnown RBP8.55□□□□□ -1.04
SF3B2-216ENST00000534765 GRK5P34947 590 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 DCTP40126 519 aa8.55□□□□□ -1.04
SF3B2-216ENST00000534765 BOP1Q14137 746 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms