RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CEBPEQ15744 281 aa30.4■■■□□ 2.46
SSSCA1-205ENST00000527920 IMPG1Q17R60 797 aa30.4■■■□□ 2.46
SSSCA1-205ENST00000527920 FAM111BQ6SJ93 734 aa30.4■■■□□ 2.46
SSSCA1-205ENST00000527920 C10orf107Q8IVU9 208 aa30.4■■■□□ 2.46
SSSCA1-205ENST00000527920 PROK2Q9HC23 129 aa30.4■■■□□ 2.46
SSSCA1-205ENST00000527920 TNFRSF12AQ9NP84 129 aa30.4■■■□□ 2.46
SSSCA1-205ENST00000527920 ZFP64Q9NPA5 681 aa30.4■■■□□ 2.46
SSSCA1-205ENST00000527920 RRAGDQ9NQL2 400 aaPredicted RBP30.4■■■□□ 2.46
SSSCA1-205ENST00000527920 CENPEQ02224 2701 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 NCOA6Q14686 2063 aaPredicted RBP30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 A0A1B0GVC2 190 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 OR14I1A6ND48 311 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 NPIPB8E9PQR5 432 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 TRIM13O60858 407 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 CBX7O95931 251 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 NAGAP17050 411 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 MAGEA5P43359 124 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 ZNF787Q6DD87 383 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 RNF165Q6ZSG1 346 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 CD163Q86VB7 1156 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 MREGQ8N565 214 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 GIMAP4Q9NUV9 329 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 PRODH2Q9UF12 536 aa30.39■■■□□ 2.46
SSSCA1-205ENST00000527920 TPOP07202 933 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 BTKQ06187 659 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 DUSP8Q13202 625 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 PRAMEF20Q5VT98 475 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 SRRM1Q8IYB3 904 aaKnown RBP30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 ADCY4Q8NFM4 1077 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 PUM2Q8TB72 1066 aaKnown RBP eCLIP30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 TMEM109Q9BVC6 243 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 GATA5Q9BWX5 397 aaPredicted RBP30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 EBPLQ9BY08 206 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 NXF5Q9H1B4 397 aaKnown RBP30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 SLC35C2Q9NQQ7 365 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 QPCTLQ9NXS2 382 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 DTX4Q9Y2E6 619 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 CCL27Q9Y4X3 112 aa30.38■■■□□ 2.45
SSSCA1-205ENST00000527920 ZNF407Q9C0G0 2248 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 PRSS44E7EML9 344 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 ACOX3O15254 700 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 SUSD5O60279 629 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 BCAS2O75934 225 aaPredicted RBP30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 PDE9AO76083 593 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 DDCP20711 480 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 PRPH2P23942 346 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 ABCD3P28288 659 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 DCAF7P61962 342 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 RPP38P78345 283 aaKnown RBP30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 LTB4RQ15722 352 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 ZNF628Q5EBL2 1059 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 TRILQ7L0X0 811 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 HSPBAP1Q96EW2 488 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 TP63Q9H3D4 680 aaPredicted RBP30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 ZNF703Q9H7S9 590 aaPredicted RBP30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 MYNNQ9NPC7 610 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 PFDN4Q9NQP4 134 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 BCAP29Q9UHQ4 241 aa30.37■■■□□ 2.45
SSSCA1-205ENST00000527920 LRRC3CA6NJW4 275 aa30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 PCSK2P16519 638 aa30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 SLC10A1Q14973 349 aa30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 EXOSC7Q15024 291 aaKnown RBP30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 TRMT12Q53H54 448 aaKnown RBP30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 FAM180BQ6P0A1 224 aa30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 TMEM64Q6YI46 380 aa30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 CCDC116Q8IYX3 515 aa30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 SPPL2AQ8TCT8 520 aa30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 EXOSC8Q96B26 276 aaKnown RBP30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 DOHHQ9BU89 302 aa30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 TAS2R7Q9NYW3 318 aa30.36■■■□□ 2.45
SSSCA1-205ENST00000527920 BCKDKO14874 412 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 HCN1O60741 890 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 EMDP50402 254 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 FBXW4P57775 412 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 ZNF630Q2M218 657 aaPredicted RBP30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 FAM71E1Q6IPT2 247 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 IKBIPQ70UQ0 350 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 OR52R1Q8NGF1 315 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 OR5M3Q8NGP4 307 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 DIO2Q92813 273 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 LCORQ96JN0 433 aaPredicted RBP30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 FAM111AQ96PZ2 611 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 SMC6Q96SB8 1091 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 ITPAQ9BY32 194 aa30.35■■■□□ 2.45
SSSCA1-205ENST00000527920 SLC28A1O00337 649 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 AQP7O14520 342 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 AZIN1O14977 448 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 TRIM3O75382 744 aaPredicted RBP30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 SNX4O95219 450 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 DRD5P21918 477 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 MPIP34949 423 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 PPICP45877 212 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 TMEM81Q6P7N7 255 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 C3P1Q6ZMU1 363 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 ZNF597Q96LX8 424 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 ANGPTL4Q9BY76 406 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 CHST11Q9NPF2 352 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 B4GALT7Q9UBV7 327 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 LIPGQ9Y5X9 500 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 DNAJC13O75165 2243 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms