RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ISG20Q96AZ6 181 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 S100PBPQ96BU1 408 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ANAPC16Q96DE5 110 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 FAM122AQ96E09 287 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 PEX11GQ96HA9 241 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 LRIG1Q96JA1 1093 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 LRR1Q96L50 414 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 CAMK1GQ96NX5 476 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 NECAB3Q96P71 396 aaPredicted RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 SLC2A13Q96QE2 648 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 GPR22Q99680 433 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 MGLLQ99685 303 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 TMEM47Q9BQJ4 181 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 MSTO1Q9BUK6 570 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 SARGQ9BW04 601 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 FAM126AQ9BYI3 521 aaPredicted RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 BRINP2Q9C0B6 783 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 TOLLIPQ9H0E2 274 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 SIK2Q9H0K1 926 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 NSUN3Q9H649 340 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 EXOSC4Q9NPD3 245 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 SLC52A3Q9NQ40 469 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 NANSQ9NR45 359 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 SNTG1Q9NSN8 517 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 HSPBP1Q9NZL4 362 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 CNOT2Q9NZN8 540 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 FBXO10Q9UK96 956 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ACSL6Q9UKU0 697 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 BTAF1O14981 1849 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ARFGEF1Q9Y6D6 1849 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 TNS2Q63HR2 1409 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 A0A087X0M5 115 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 A0A1B0GX30 115 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 A0A1W2PPC1 479 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 MEX3AA1L020 520 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 TMEM218A2RU14 115 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 URADA6NGE7 173 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 OR6C75A6NL08 312 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 A8MXE2 369 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 MKRN2OSH3BPM6 223 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 AP4M1O00189 453 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 MEIS1O00470 390 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ADAM10O14672 748 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 HCRTR2O43614 444 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 SCN2BO60939 215 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 PTHP01270 115 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 IGHV2-5P01817 119 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 SCG5P05408 212 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 FHP07954 510 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 QDPRP09417 244 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 GIPP09681 153 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 ALDOCP09972 364 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 OR8G3PP0DMU2 310 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 PRPS2P11908 318 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 GABRA1P14867 456 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ZNF37AP17032 561 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 GABRB1P18505 474 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 LAG3P18627 525 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 AGAP20933 346 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 NFYAP23511 347 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 HSD3B2P26439 372 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 S100A11P31949 105 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 GGT2P36268 569 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 PBX3P40426 434 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 CDKN2CP42773 168 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 OMPP47874 163 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 CLCN7P51798 805 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 PLK1P53350 603 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 CTSCP53634 463 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 CARD18P57730 90 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 VSX2P58304 361 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 RAP2BP61225 183 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 SLC7A9P82251 487 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 OGDHQ02218 1023 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ELAVL2Q12926 359 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 CDH18Q13634 790 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 DDX39BQ13838 428 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 COL9A2Q14055 689 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 RCAN2Q14206 197 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 LRRC32Q14392 662 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 GPR176Q14439 515 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 HLXQ14774 488 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 SLC9A5Q14940 896 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 P2RY14Q15391 338 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ZNHIT3Q15649 155 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 SMN1Q16637 294 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 ASPRV1Q53RT3 343 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 C10orf91Q5T1B1 145 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 FAM46CQ5VWP2 391 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ZNF57Q68EA5 555 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 NADSYN1Q6IA69 706 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 HEPHL1Q6MZM0 1159 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 MZT2AQ6P582 158 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 CES3Q6UWW8 571 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 SPNS3Q6ZMD2 512 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 USP30Q70CQ3 517 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ABI3BPQ7Z7G0 1075 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 GALNT5Q7Z7M9 940 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ZNF605Q86T29 641 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ISCA2Q86U28 154 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms