RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 HDAC2Q92769 488 aaKnown RBP15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 L3HYPDHQ96EM0 354 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 MS4A4EQ96PG1 132 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 SLC6A15Q9H2J7 730 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 CLEC4EQ9ULY5 219 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 NUP188Q5SRE5 1749 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 ANHXE9PGG2 379 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 TSPAN9O75954 239 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 TIMP2P16035 220 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 NR0B1P51843 470 aaKnown RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 GALNT1Q10472 559 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 BNIP3Q12983 259 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 PPP1R14BQ96C90 147 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 NEDD4LQ96PU5 975 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 SACM1LQ9NTJ5 587 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 USP3Q9Y6I4 520 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 ARFGEF2Q9Y6D5 1785 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 SOBPA7XYQ1 873 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 SOCS2O14508 198 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 HTRA2O43464 458 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 EFR3AQ14156 821 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 FAM26DQ5JW98 314 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 PPP1R3BQ86XI6 285 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 NLGN4XQ8N0W4 816 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 SPERTQ8NA61 448 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 EDAQ92838 391 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 SLC7A6OSQ96CW6 309 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 ABCD2Q9UBJ2 740 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 NUMBLQ9Y6R0 609 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 PRSS38A1L453 326 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 GFRA2O00451 464 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 PHYHO14832 338 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 CD68P34810 354 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 THBS2P35442 1172 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 SOX2P48431 317 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 BLOC1S3Q6QNY0 202 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 TAS2R10Q9NYW0 307 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 HIDE1A8MVS5 230 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 H3BSH0 61 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 HPRP00739 348 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 ZNF16P17020 682 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 IL4RP24394 825 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 SLC6A8P48029 635 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 RIDAP52758 137 aaKnown RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 RPS26P62854 115 aaKnown RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 SRYQ05066 204 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 LAPTM4AQ15012 233 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 COQ5Q5HYK3 327 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 LRFN4Q6PJG9 635 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 MCATQ8IVS2 390 aaKnown RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 PITX2Q99697 317 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 FUZQ9BT04 418 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 LRIT1Q9P2V4 623 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 CPNE7Q9UBL6 633 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 NKX1-2Q9UD57 310 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 DHDHQ9UQ10 334 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 DOT1LQ8TEK3 1739 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 CPNE6O95741 557 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 MRPL3P09001 348 aaKnown RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 C7P10643 843 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 KDELC1Q6UW63 502 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 AGBL5Q8NDL9 886 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 OR7G3Q8NG95 312 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 OR2L2Q8NH16 312 aa15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 MRPL38Q96DV4 380 aaKnown RBP15.45■□□□□ 0.06
PCDHA3-201ENST00000522353 PRRC2BQ5JSZ5 2229 aaKnown RBP15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 hCG_1807616A0A1W2PRN6 198 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 C17orf105B2RV13 164 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 ANXA3P12429 323 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 SLC6A11P48066 632 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 RAB6CQ53S08 254 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 SNX29P2Q8IUI4 249 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 UEVLDQ8IX04 471 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 RHBDF1Q96CC6 855 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 FBXL20Q96IG2 436 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 DMRTB1Q96MA1 342 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 RAB6CQ9H0N0 254 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 FN3KQ9H479 309 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 CDH20Q9HBT6 801 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 C12orf4Q9NQ89 552 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 VNN3Q9NY84 501 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 F3P13726 295 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 RBPJQ06330 500 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 LRRC26Q2I0M4 334 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 EXOC3L2Q2M3D2 409 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 KANK2Q63ZY3 851 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 ZNF551Q7Z340 670 aaPredicted RBP15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 TEX26Q8N6G2 289 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 OR52E1Q8NGJ3 308 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 CD200R1Q8TD46 325 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 DOK4Q8TEW6 326 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 SEC14L1Q92503 715 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 TMEM19Q96HH6 336 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 CCDC106Q9BWC9 280 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 RXFP3Q9NSD7 469 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 SLC39A1Q9NY26 324 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 TRAPPC13A5PLN9 417 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 CTBSQ01459 385 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 MINDY1Q8N5J2 469 aa15.44■□□□□ 0.06
PCDHA3-201ENST00000522353 THAP6Q8TBB0 222 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms