RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 KIAA0895LQ68EN5 471 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 NANOGNBQ7Z5D8 188 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 CAMKK1Q8N5S9 505 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 TBC1D19Q8N5T2 526 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 GDPD1Q8N9F7 314 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 CDC26Q8NHZ8 85 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 OR2A14Q96R47 310 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 CENPOQ9BU64 300 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 MS4A8Q9BY19 250 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 SLC22A4Q9H015 551 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 C6orf106Q9H6K1 298 aaPredicted RBP17.3■□□□□ 0.36
SDC2-202ENST00000518385 IMP3Q9NV31 184 aaKnown RBP17.3■□□□□ 0.36
SDC2-202ENST00000518385 GPR83Q9NYM4 423 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 TAS2R9Q9NYW1 312 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 MOSPD1Q9UJG1 213 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 PCOLCE2Q9UKZ9 415 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.3■□□□□ 0.36
SDC2-202ENST00000518385 CFAP20Q9Y6A4 193 aaKnown RBP17.3■□□□□ 0.36
SDC2-202ENST00000518385 IRGMA1A4Y4 181 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 TNFRSF21O75509 655 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 CLEC3AO75596 197 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 ADAP00813 363 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 IGHV4-34P06331 123 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 YES1P07947 543 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 FURINP09958 794 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 AKT2P31751 481 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 GRK5P34947 590 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 TGFBR1P36897 503 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 XCR1P46094 333 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 IDH2P48735 452 aaKnown RBP17.29■□□□□ 0.36
SDC2-202ENST00000518385 MEF2AQ02078 507 aaPredicted RBP17.29■□□□□ 0.36
SDC2-202ENST00000518385 C2orf80Q0P641 193 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 RPE65Q16518 533 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 ARMC4Q5T2S8 1044 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 TMPRSS11AQ6ZMR5 421 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 LIX1LQ8IVB5 337 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 CYP4Z2PQ8N1L4 340 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 ZNF740Q8NDX6 193 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 B3GNT7Q8NFL0 401 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 UBE2FQ969M7 185 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 PPCDCQ96CD2 204 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 ZNF764Q96H86 408 aaPredicted RBP17.29■□□□□ 0.36
SDC2-202ENST00000518385 BMFQ96LC9 184 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 SDHCQ99643 169 aaPredicted RBP17.29■□□□□ 0.36
SDC2-202ENST00000518385 IER2Q9BTL4 223 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 ACAT2Q9BWD1 397 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 TPSD1Q9BZJ3 242 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 TMEM184CQ9NVA4 438 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 MS4A12Q9NXJ0 267 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 SH3BP4Q9P0V3 963 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 ANGPT4Q9Y264 503 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 NOX1Q9Y5S8 564 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 ENPP4Q9Y6X5 453 aa17.29■□□□□ 0.36
SDC2-202ENST00000518385 IGHV1OR15-9A0A0B4J2B8 117 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 TRBC2A0A5B9 178 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 POM121BA6NF01 834 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 GPR37L1O60883 481 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 DCNP07585 359 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 PSMA1P25786 263 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 PTBP1P26599 531 aaKnown RBP eCLIP17.28■□□□□ 0.365e-7■■□□□ 11.7
SDC2-202ENST00000518385 TNFSF8P32971 234 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 NUDT1P36639 197 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 NR4A2P43354 598 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 CLDN2P57739 230 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 TRA2BP62995 288 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 MRPS15P82914 257 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 CHRNEQ04844 493 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 CLDN22Q8N7P3 220 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 LMNTD1Q8N9Z9 388 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 LINC01555Q8NAE3 123 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 OR2A1Q8NGT9 310 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 WDR48Q8TAF3 677 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 MYOCQ99972 504 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 SARGQ9BW04 601 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 MND1Q9BWT6 205 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 NDEL1Q9GZM8 345 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 FGF22Q9HCT0 170 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 FTSJ1Q9UET6 329 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 SNX7Q9UNH6 387 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 ICKQ9UPZ9 632 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 EXO1Q9UQ84 846 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 RBMX2Q9Y388 322 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 TMEM229AB2RXF0 380 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 ZNF670-ZNF695F2Z2N8 137 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 PRICKLE3O43900 615 aaPredicted RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 IL1AP01583 271 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 KLK1P06870 262 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 CXCL12P48061 93 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 CRISP1P54107 249 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 SMIM11AP58511 58 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 CSNK1G2P78368 415 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 C1DQ13901 141 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 TSTQ16762 297 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 EXOC3L2Q2M3D2 409 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 TMEM35AQ53FP2 167 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 TIGD3Q6B0B8 471 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 HSDL2Q6YN16 418 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 MAMSTRQ6ZN01 415 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 TSEN54Q7Z6J9 526 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 C2orf73Q8N5S3 287 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms