RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 HHATQ5VTY9 493 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 TTC19Q6DKK2 380 aaPredicted RBP4.29□□□□□ -1.72
MATR3-216ENST00000511249 ZSCAN25Q6NSZ9 544 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 C16orf87Q6PH81 154 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 ZNF841Q6ZN19 808 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 DPY19L2P2Q6ZN68 376 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 RFPL4BQ6ZWI9 263 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 ANO5Q75V66 913 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 ITIH5Q86UX2 942 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 GPBP1Q86WP2 473 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 SFR1Q86XK3 245 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 VSTM4Q8IW00 320 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 ZNF843Q8N446 348 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 SLC37A3Q8NCC5 494 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 BBOF1Q8ND07 529 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 NFAM1Q8NET5 270 aaPredicted RBP4.29□□□□□ -1.72
MATR3-216ENST00000511249 OR5D13Q8NGL4 314 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 RAB3IL1Q8TBN0 382 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 ANKRD49Q8WVL7 239 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 RPL3LQ92901 407 aaKnown RBP4.29□□□□□ -1.72
MATR3-216ENST00000511249 ZNF385AQ96PM9 386 aaKnown RBP4.29□□□□□ -1.72
MATR3-216ENST00000511249 FAM192AQ9GZU8 254 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 S100A14Q9HCY8 104 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 RAB18Q9NP72 206 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 RPRD1BQ9NQG5 326 aaKnown RBP4.29□□□□□ -1.72
MATR3-216ENST00000511249 GDF3Q9NR23 364 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 HIF1ANQ9NWT6 349 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 HOXC10Q9NYD6 342 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 ONECUT1Q9UBC0 465 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 CHTOPQ9Y3Y2 248 aaKnown RBP4.29□□□□□ -1.72
MATR3-216ENST00000511249 KLF2Q9Y5W3 355 aaPredicted RBP4.29□□□□□ -1.72
MATR3-216ENST00000511249 TOP2AP11388 1531 aaKnown RBP4.29□□□□□ -1.72
MATR3-216ENST00000511249 ATP10AO60312 1499 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 PLB1Q6P1J6 1458 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 RAPGEF2Q9Y4G8 1499 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 NAIPQ13075 1403 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 FHOD3Q2V2M9 1422 aa4.29□□□□□ -1.72
MATR3-216ENST00000511249 RPAP1Q9BWH6 1393 aaPredicted RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 SYNMO15061 1565 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 SPATA31D1Q6ZQQ2 1576 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 CUX1P39880 1505 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 PRDM15P57071 1507 aaPredicted RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 A0A075B6Q4 140 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 LOC105371242A0A075B767 164 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 IGLV9-49A0A0B4J1Y8 123 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 LY6G6EA0A0G2JKS1 128 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 TRBV4-1A0A0J9YWV2 114 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 FAM240BA0A1B0GVZ2 78 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 SHISA7A6NL88 538 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 LRRC30A6NM36 301 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 HNRNPCL2B2RXH8 293 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 H0YL77 283 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 CCSO14618 274 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 LIN7AO14910 233 aaPredicted RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 ATP6V0E1O15342 81 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 FCMRO60667 390 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 GLRA3O75311 464 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 CTAG2O75638 210 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 IGHV4-39P01824 125 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 F7P08709 466 aaPredicted RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 PNMTP11086 282 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 NT5EP21589 574 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 LBX1P52954 281 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 BTG1P62324 171 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 RPS4XP62701 263 aaKnown RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 HERVK_113P63132 956 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 ERVK-8P63133 956 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 BST1Q10588 318 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 ELAVL3Q14576 367 aaKnown RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 SF3B4Q15427 424 aaKnown RBP eCLIP4.28□□□□□ -1.729e-8■■■■□ 20.2
MATR3-216ENST00000511249 CDKN3Q16667 212 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 DUSP5Q16690 384 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 PARP6Q2NL67 630 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 BCL7AQ4VC05 210 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 PDLIM3Q53GG5 364 aaPredicted RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 FGD3Q5JSP0 725 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 PDSS1Q5T2R2 415 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 LCN1P1Q5VSP4 162 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 IRAK1BP1Q5VVH5 260 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 CLEC2AQ6UVW9 174 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 ASRGL1Q7L266 308 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 C16orf62Q7Z3J2 963 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 PSTKQ8IV42 348 aaKnown RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 UBE2J2Q8N2K1 259 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 ARL14Q8N4G2 192 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 CCDC185Q8N715 623 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 NIPA2Q8N8Q9 360 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 MAB21L3Q8N8X9 362 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 NECAB1Q8N987 351 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 ZNF383Q8NA42 475 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 RELL2Q8NC24 303 aaPredicted RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 KCNH5Q8NCM2 988 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 OR5AU1Q8NGC0 362 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 RDH11Q8TC12 318 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 COQ2Q96H96 371 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 PRICKLE1Q96MT3 831 aaPredicted RBP4.28□□□□□ -1.72
MATR3-216ENST00000511249 UHRF2Q96PU4 802 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 BCL7BQ9BQE9 202 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 ERVK-6Q9BXR3 956 aa4.28□□□□□ -1.72
MATR3-216ENST00000511249 IL25Q9H293 177 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms