RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PQLC3Q8N755 202 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ZFP62Q8NB50 900 aaPredicted RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 METTL6Q8TCB7 284 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 DYDC1Q8WWB3 177 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 C1orf54Q8WWF1 131 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 UBE2FQ969M7 185 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PGM2Q96G03 612 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 TMEM41AQ96HV5 264 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF416Q9BWM5 594 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 TRIM55Q9BYV6 548 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PLA2G2EQ9NZK7 142 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 MYOTQ9UBF9 498 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 AJAP1Q9UKB5 411 aaPredicted RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 USP22Q9UPT9 525 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 OARD1Q9Y530 152 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 WIF1Q9Y5W5 379 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ATP23Q9Y6H3 246 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 TDRD6O60522 2096 aaKnown RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 MYOFQ9NZM1 2061 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 HELZP42694 1942 aaKnown RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 SPTAN1Q13813 2472 aaKnown RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PLSCR5A0PG75 271 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TTC24A2A3L6 582 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 WWP2O00308 870 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 DNPH1O43598 174 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 GLRA3O75311 464 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CALCAP01258 141 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF888P0CJ79 500 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 PRPS2P11908 318 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 SRD5A1P18405 259 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TFE3P19532 575 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 KLK2P20151 261 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CHI3L1P36222 383 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 SERPINB5P36952 375 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 COILP38432 576 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 FABP6P51161 128 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 YBX1P67809 324 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 SRSF1Q07955 248 aaKnown RBP eCLIP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CSTF3Q12996 717 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CUL3Q13618 768 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 FASTKQ14296 549 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 FRG1Q14331 258 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CEBPEQ15744 281 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 ARL13AQ5H913 290 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF311Q5JNZ3 666 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF648Q5T619 568 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 DENND5AQ6IQ26 1287 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TMEM154Q6P9G4 183 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 NPNTQ6UXI9 565 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 ESPNLQ6ZVH7 1005 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TRILQ7L0X0 811 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF550Q7Z398 422 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 NET1Q7Z628 596 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CUZD1Q86UP6 607 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CPNE9Q8IYJ1 553 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 C1orf87Q8N0U7 546 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TEX9Q8N6V9 391 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 POMGNT2Q8NAT1 580 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 SPC24Q8NBT2 197 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 OR52K2Q8NGK3 314 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 OR11L1Q8NGX0 322 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 RDH11Q8TC12 318 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 ACMSDQ8TDX5 336 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TRPC4APQ8TEL6 797 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 PPWD1Q96BP3 646 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 DDIT4LQ96D03 193 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 MTERF3Q96E29 417 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 PIK3IP1Q96FE7 263 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 GMPPAQ96IJ6 420 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 C3orf30Q96M34 536 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 DDX47Q9H0S4 455 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 ZBTB20Q9HC78 741 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TMEM45AQ9NWC5 275 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 OXSMQ9NWU1 459 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 FAM120CQ9NX05 1096 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 EHD3Q9NZN3 535 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TMEM9Q9P0T7 183 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 XPR1Q9UBH6 696 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CTSFQ9UBX1 484 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 SLC23A2Q9UGH3 650 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CNOT6Q9ULM6 557 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 PLAGL1Q9UM63 463 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TMED5Q9Y3A6 229 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 MRPS18CQ9Y3D5 142 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 NEU2Q9Y3R4 380 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 DNAH3Q8TD57 4116 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 SPTBN4Q9H254 2564 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 HTR3EA5X5Y0 456 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 DNALI1O14645 258 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 OR2T1O43869 369 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 SCN2BO60939 215 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 MRPL33O75394 65 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 TNFRSF21O75509 655 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 PPM1BO75688 479 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CYP7B1O75881 506 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CNOT4O95628 575 aaKnown RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 F7P08709 466 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-209ENST00000511124 COX6A1P12074 109 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 DDCP20711 480 aa2.63□□□□□ -1.99
CLOCK-209ENST00000511124 CXCR1P25024 350 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms