RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 NPIPA3F8WFD2 350 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 BCKDKO14874 412 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 PCDH7O60245 1069 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 HCN1O60741 890 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 ERAL1O75616 437 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 IL3P08700 152 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 MYL2P10916 166 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 DRD2P14416 443 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 ZNF16P17020 682 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 ENDOUP21128 410 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 NT5EP21589 574 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 TIA1P31483 386 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 CRHR1P34998 444 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 PTGER4P35408 488 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 DEKP35659 375 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 FEN1P39748 380 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 SLCO1A2P46721 670 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 TMED10P49755 219 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 EMDP50402 254 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 FOXA1P55317 472 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 FBXW4P57775 412 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 DNAJB13P59910 316 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 KCNJ2P63252 427 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 HMGCS1Q01581 520 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 SLC18A2Q05940 514 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 ACSM2AQ08AH3 577 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 SLC10A1Q14973 349 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 EXOSC7Q15024 291 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 CEBPEQ15744 281 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 CCDC153Q494R4 210 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 SPIN4Q56A73 249 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 TBCELQ5QJ74 424 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 C6orf163Q5TEZ5 329 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 FNDC7Q5VTL7 733 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 HLA-DQA1Q5Y7H0 255 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 ACSM2BQ68CK6 577 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 TMEM211Q6ICI0 200 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 TMEM81Q6P7N7 255 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 SIMC1Q8NDZ2 872 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 FAM13CQ8NE31 585 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 RDH11Q8TC12 318 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 ZNF675Q8TD23 568 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 EPS8L3Q8TE67 593 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 UBLCP1Q8WVY7 318 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 SDCCAG3Q96C92 435 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 KLHL29Q96CT2 875 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 KCNA7Q96RP8 456 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 KCNK17Q96T54 332 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 ANGPTL4Q9BY76 406 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 TRIM8Q9BZR9 551 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 NXF5Q9H1B4 397 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 ANKZF1Q9H8Y5 726 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 MID1IP1Q9NPA3 183 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 ACKR4Q9NPB9 350 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 PNPLA3Q9NST1 481 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 UTS2RQ9UKP6 389 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 PSME2Q9UL46 239 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 GRID1Q9ULK0 1009 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 BOKQ9UMX3 212 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 CFL2Q9Y281 166 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 DLGAP4Q9Y2H0 992 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 FAM215AQ9Y5M1 114 aa8.33□□□□□ -1.08
PDLIM5-209ENST00000506632 FBN2P35556 2912 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 CSMD1Q96PZ7 3565 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 TRGV5A0A0B4J1U4 118 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 ATP6AP2A0A1C7CYW4 349 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 CCDC151A5D8V7 595 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 FIGNL2A6NMB9 653 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 CAPN14A8MX76 684 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 H3BQF6 201 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 TP53I11O14683 189 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 CDH16O75309 829 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 ATP6AP2O75787 350 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 LRATO95237 230 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 ABCB1P08183 1280 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 NAGAP17050 411 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 IGFBP2P18065 325 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 ABCD3P28288 659 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 KIR3DL1P43629 444 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 GSTM5P46439 218 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 CCT5P48643 541 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 ALDH9A1P49189 494 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 MAN2A2P49641 1150 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 NAGLUP54802 743 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 NRG3P56975 720 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 NUP107P57740 925 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 LTB4RQ15722 352 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 TRMT12Q53H54 448 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 ZNF628Q5EBL2 1059 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 BICRALQ6AI39 1079 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 RTL6Q6ICC9 239 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 FAM180BQ6P0A1 224 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 TRIM46Q7Z4K8 759 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 LURAP1LQ8IV03 231 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 MCEMP1Q8IX19 187 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 ZNF295-AS1Q8N0V1 137 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 CCNYL1Q8N7R7 359 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 ADCY4Q8NFM4 1077 aa8.32□□□□□ -1.08
PDLIM5-209ENST00000506632 OR5M3Q8NGP4 307 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms