RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 UBE2E3Q969T4 207 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 ESAMQ96AP7 390 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 ANKRD9Q96BM1 317 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 ARSGQ96EG1 525 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 Q96MF0 132 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 PELOQ9BRX2 385 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 WDR83Q9BRX9 315 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 RPF2Q9H7B2 306 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 PRDM7Q9NQW5 492 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 MS4A12Q9NXJ0 267 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 NSMCE4AQ9NXX6 385 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 CNOT11Q9UKZ1 510 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 JRKLQ9Y4A0 524 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 HRNRQ86YZ3 2850 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 KIAA1549Q9HCM3 1950 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 MAP1AP78559 2803 aaPredicted RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 MPDZO75970 2070 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 FREM3P0C091 2139 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 ANKRD33BA6NCL7 494 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 CAPN14A8MX76 684 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 H0Y3Z8 333 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 PRKRAO75569 313 aaKnown RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 TBX6O95947 436 aaPredicted RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 TGFB1P01137 390 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 HRGP04196 525 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 IGKV3-11P04433 115 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 CYP4B1P13584 511 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 ALOX15P16050 662 aaPredicted RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 HIST1H1TP22492 207 aaPredicted RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 TLX1P31314 330 aaPredicted RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 ELK3P41970 407 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 ARFIP1P53367 373 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 HNRNPH2P55795 449 aaKnown RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 FBXW4P57775 412 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 CHIT1Q13231 466 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 SLAMF1Q13291 335 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 RPS6KA2Q15349 733 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 TGFBIQ15582 683 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 TBCCQ15814 346 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 WIPI1Q5MNZ9 446 aaPredicted RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 DGAT2L6Q6ZPD8 337 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 ZC3HC1Q86WB0 502 aaKnown RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 MYLK4Q86YV6 388 aaPredicted RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 KRTAP1-3Q8IUG1 177 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 IGDCC3Q8IVU1 814 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 BBOF1Q8ND07 529 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 ACTRT1Q8TDG2 376 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 PERPQ96FX8 193 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 FBXL20Q96IG2 436 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 RILPQ96NA2 401 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 GNRHR2Q96P88 292 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 CENPKQ9BS16 269 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 TMEM79Q9BSE2 394 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 SORBS1Q9BX66 1292 aaKnown RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 DERL2Q9GZP9 239 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 WWTR1Q9GZV5 400 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 PRDM14Q9GZV8 571 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 YY1AP1Q9H869 796 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 UBTD1Q9HAC8 227 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 PROK2Q9HC23 129 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 TEX10Q9NXF1 929 aaPredicted RBP8.28□□□□□ -1.08
DHFR-202ENST00000504396 GALNT8Q9NY28 637 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 CD274Q9NZQ7 290 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 HIF3AQ9Y2N7 669 aa8.28□□□□□ -1.08
DHFR-202ENST00000504396 NINQ8N4C6 2090 aa8.27□□□□□ -1.08
DHFR-202ENST00000504396 NSD1Q96L73 2696 aaPredicted RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 C2orf92A0A1B0GVN3 265 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 CD8B2A6NJW9 211 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 OR6C76A6NM76 312 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 EFCAB8A8MWE9 144 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 CDH16O75309 829 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 TRIM3O75382 744 aaPredicted RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 STK16O75716 305 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 IL18BPO95998 194 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 C1QAP02745 245 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 BMP7P18075 431 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 KRT15P19012 456 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 GALNSP34059 522 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 BUD31P41223 144 aaPredicted RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 CASP2P42575 452 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 TMED10P49755 219 aaKnown RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 CDK9P50750 372 aaKnown RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 NRG3P56975 720 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 TAS2R39P59534 338 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 ETF1P62495 437 aaKnown RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 RPP38P78345 283 aaKnown RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 TNFRSF17Q02223 184 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 SRYQ05066 204 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 MGAT5Q09328 741 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 E2F2Q14209 437 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 MORF4L2Q15014 288 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 EBPQ15125 230 aaKnown RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 NTRK2Q16620 822 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 KBTBD12Q3ZCT8 623 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 EIPR1Q53HC9 387 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 DCST1Q5T197 706 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 C6orf163Q5TEZ5 329 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 C18orf63Q68DL7 685 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 SULT1C3Q6IMI6 304 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms