RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SPATA5L1Q9BVQ7 753 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 DNAAF2Q9NVR5 837 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 ACAD8Q9UKU7 415 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 POFUT2Q9Y2G5 429 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 HCN4Q9Y3Q4 1203 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 CCDC160A6NGH7 325 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 ABCB7O75027 752 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 CPNE6O95741 557 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 CPMP14384 443 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 CAPZBP47756 277 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 PMS2P3Q13401 168 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 FAM111BQ6SJ93 734 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 GPR141Q7Z602 305 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 CA13Q8N1Q1 262 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 OR2L13Q8N349 312 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 OR5T3Q8NGG3 340 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 PHF10Q8WUB8 498 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 SGCDQ92629 289 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 NIPSNAP1Q9BPW8 284 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 POLR1BQ9H9Y6 1135 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 EQTNQ9NQ60 294 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 STARD5Q9NSY2 213 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 DOLKQ9UPQ8 538 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 EML5Q05BV3 1969 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 SLC9B1P1A6NJY1 282 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 EPPINO95925 133 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 CTSBP07858 339 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 HTR1AP08908 422 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 PORP16435 677 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 JUNBP17275 347 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 CBLP22681 906 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 COLEC12Q5KU26 742 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 RBM45Q8IUH3 476 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 LACC1Q8IV20 430 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 DNAJC22Q8N4W6 341 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 TMEM52Q8NDY8 209 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 OR9Q2Q8NGE9 314 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 COL26A1Q96A83 441 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 MS4A4EQ96PG1 132 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 ALPK1Q96QP1 1244 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 NMNAT1Q9HAN9 279 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 RHCGQ9UBD6 479 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 LIPT1Q9Y234 373 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 SPACA6W5XKT8 324 aa20.03■□□□□ 0.8
UBE2D3-216ENST00000503742 DSPPQ9NZW4 1301 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 LMO7DNF2Z398 122 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 AQP9O43315 295 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 CCNB2O95067 398 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 ANGPTL1O95841 491 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 PROS1P07225 676 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 BCKDHBP21953 392 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 RGS19P49795 217 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 CXCR4P61073 352 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 HNRNPKP61978 463 aaKnown RBP eCLIP20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 MAD2L1BPQ15013 274 aaPredicted RBP20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 DEFB110Q30KQ9 67 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 ZNF628Q5EBL2 1059 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 C6orf132Q5T0Z8 1188 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 ZNF770Q6IQ21 691 aaPredicted RBP20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 MFSD12Q6NUT3 480 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 SLC36A4Q6YBV0 504 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 MCATQ8IVS2 390 aaKnown RBP20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 SPACA7Q96KW9 195 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 TRNT1Q96Q11 434 aaKnown RBP20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 SLC38A1Q9H2H9 487 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 GIN1Q9NXP7 522 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 PTGFRNQ9P2B2 879 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 RSL24D1Q9UHA3 163 aaKnown RBP20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 PCDHGA6Q9Y5G7 932 aa20.02■□□□□ 0.8
UBE2D3-216ENST00000503742 SCN2AQ99250 2005 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 LGI1O95970 557 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 COL9A2Q14055 689 aaPredicted RBP20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 PRTGQ2VWP7 1150 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 GPAT3Q53EU6 434 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 LAIR1Q6GTX8 287 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 HEPHL1Q6MZM0 1159 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 CDC73Q6P1J9 531 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 OGFOD3Q6PK18 319 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 B3GNT8Q7Z7M8 397 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 SDR16C5Q8N3Y7 309 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 DNASE2BQ8WZ79 361 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 SLC35A4Q96G79 324 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 PTTG2Q9NZH5 202 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 TRBV4-1A0A0J9YWV2 114 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 K7ESF4 209 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 FGF17O60258 216 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 ATP1B1P05026 303 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 TTKP33981 857 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 NUP107P57740 925 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 SHC2P98077 582 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 RAB39AQ14964 217 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 FHL5Q5TD97 284 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 XAF1Q6GPH4 301 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 B3GNT6Q6ZMB0 384 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 ALDH16A1Q8IZ83 802 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 SPARTQ8N0X7 666 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 BPIFB6Q8NFQ5 453 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 VANGL1Q8TAA9 524 aaPredicted RBP20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 TANKQ92844 425 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms