RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 A0A1W2PRQ8 180 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 EFCAB10A6NFE3 127 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 M0R082 166 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 TLR4O00206 839 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 NARSO43776 548 aaKnown RBP12.27□□□□□ -0.44
GARNL3-220ENST00000496711 EPPINO95925 133 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 LGI1O95970 557 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 ADORA3P0DMS8 318 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 UGT2B7P16662 529 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 LTBRP36941 435 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 LIPAP38571 399 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 OPRL1P41146 370 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 NCS1P62166 190 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 ST3GAL4Q11206 333 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 ILKQ13418 452 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 TMED1Q13445 227 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 PIN1Q13526 163 aaPredicted RBP12.27□□□□□ -0.44
GARNL3-220ENST00000496711 SUZ12Q15022 739 aaKnown RBP12.27□□□□□ -0.44
GARNL3-220ENST00000496711 TIGD6Q17RP2 521 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 TMEM31Q5JXX7 168 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 SLX4IPQ5VYV7 408 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 C16orf87Q6PH81 154 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 TRIM48Q8IWZ4 208 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 B3GNT7Q8NFL0 401 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 C9orf43Q8TAL5 461 aaPredicted RBP12.27□□□□□ -0.44
GARNL3-220ENST00000496711 SLC7A13Q8TCU3 470 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 DYNC2LI1Q8TCX1 351 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 ZNF675Q8TD23 568 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 ELP4Q96EB1 424 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 C16orf58Q96GQ5 468 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 FNDC11Q9BVV2 318 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 ANKMY1Q9P2S6 941 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 NDOR1Q9UHB4 597 aa12.27□□□□□ -0.44
GARNL3-220ENST00000496711 GSAPA4D1B5 854 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 P2RX6O15547 441 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 TNFSF14O43557 240 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 NME6O75414 186 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-220ENST00000496711 SOX14O95416 240 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 GABRG2P18507 467 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 XKP51811 444 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 DGKEP52429 567 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 ILF3Q12906 894 aaKnown RBP eCLIP12.27□□□□□ -0.45
GARNL3-220ENST00000496711 TARDBPQ13148 414 aaKnown RBP eCLIP12.27□□□□□ -0.45
GARNL3-220ENST00000496711 GPR18Q14330 331 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 IRF3Q14653 427 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 SYT16Q17RD7 645 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 FBXO43Q4G163 708 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 C12orf73Q69YU5 71 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 DGLUCYQ7Z3D6 616 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 HMGN2P46Q86SG4 172 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 ADCK1Q86TW2 530 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 LINC00471Q8N535 108 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 SMRP1Q8NCR6 262 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 OR6T1Q8NGN1 323 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 OR10G6Q8NH81 332 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 ZCCHC10Q8TBK6 192 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 KLHL6Q8WZ60 621 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 RPL3LQ92901 407 aaKnown RBP12.27□□□□□ -0.45
GARNL3-220ENST00000496711 TM4SF19Q96DZ7 209 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 VMP1Q96GC9 406 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 C10orf90Q96M02 699 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 OR2A5Q96R48 311 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 SERINC2Q96SA4 455 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 POLR2J3Q9H1A7 115 aaKnown RBP12.27□□□□□ -0.45
GARNL3-220ENST00000496711 EQTNQ9NQ60 294 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 CALML5Q9NZT1 146 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 CD207Q9UJ71 328 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 MMP17Q9ULZ9 603 aa12.27□□□□□ -0.45
GARNL3-220ENST00000496711 URADA6NGE7 173 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 EFCAB9A8MZ26 197 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 H3BN98 237 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 J3QRK9 145 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 SYT5O00445 386 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 NADKO95544 446 aaPredicted RBP12.26□□□□□ -0.45
GARNL3-220ENST00000496711 SEMA4FO95754 770 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 PTHP01270 115 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 ALPPP05187 535 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 PIPP12273 146 aaPredicted RBP12.26□□□□□ -0.45
GARNL3-220ENST00000496711 POLR2CP19387 275 aaPredicted RBP12.26□□□□□ -0.45
GARNL3-220ENST00000496711 CPN2P22792 545 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 MAN2A2P49641 1150 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 SNRPGP62308 76 aaKnown RBP12.26□□□□□ -0.45
GARNL3-220ENST00000496711 TFF2Q03403 129 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 ZNF846Q147U1 533 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 NR1D2Q14995 579 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 LTB4RQ15722 352 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 NDUFA9Q16795 377 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 ATAD3BQ5T9A4 648 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 FBXO42Q6P3S6 717 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 PODNL1Q6PEZ8 512 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 ZNF367Q7RTV3 350 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 LRRC25Q8N386 305 aaPredicted RBP12.26□□□□□ -0.45
GARNL3-220ENST00000496711 LGALS12Q96DT0 336 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 CRELD1Q96HD1 420 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 SH3YL1Q96HL8 342 aaPredicted RBP12.26□□□□□ -0.45
GARNL3-220ENST00000496711 ACTRT3Q9BYD9 372 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 WDR12Q9GZL7 423 aaKnown RBP12.26□□□□□ -0.45
GARNL3-220ENST00000496711 HMG20AQ9NP66 347 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 MAN2C1Q9NTJ4 1040 aa12.26□□□□□ -0.45
GARNL3-220ENST00000496711 ACTR10Q9NZ32 417 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms