RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SAMD14Q8IZD0 417 aaPredicted RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 OR2L13Q8N349 312 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 ARL14Q8N4G2 192 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 OR4K14Q8NGD5 310 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 OR5T3Q8NGG3 340 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 VANGL1Q8TAA9 524 aaPredicted RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 C1orf216Q8TAB5 229 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 APH1BQ8WW43 257 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 XAGE5Q8WWM1 108 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 RASSF5Q8WWW0 418 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 CLDN23Q96B33 292 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 DGCR14Q96DF8 476 aaKnown RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 C16orf58Q96GQ5 468 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 SPACA7Q96KW9 195 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 APOL4Q9BPW4 351 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 NIPSNAP1Q9BPW8 284 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 CCDC3Q9BQI4 270 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 WFDC6Q9BQY6 131 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 FUZQ9BT04 418 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 SLC38A1Q9H2H9 487 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 IL21RQ9HBE5 538 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 C3orf14Q9HBI5 128 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 PAPOLBQ9NRJ5 636 aaKnown RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 ACER3Q9NUN7 267 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 MS4A12Q9NXJ0 267 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 BLOC1S6Q9UL45 172 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 COMMD3-BMI1R4GMX3 469 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 GOLGA4Q13439 2230 aaKnown RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 CCDC160A6NGH7 325 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 TLR4O00206 839 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 CYR61O00622 381 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 UBXN7O94888 489 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 MED26O95402 600 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 FMO3P31513 532 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 SLC5A2P31639 672 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 GGT2P36268 569 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 GABRA4P48169 554 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 HMGA2P52926 109 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 ID2Q02363 134 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 NPRL3Q12980 569 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 PMS2P3Q13401 168 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 NPTX1Q15818 432 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 NEDD8Q15843 81 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 PUS10Q3MIT2 529 aaKnown RBP9.99□□□□□ -0.81
CLCN6-208ENST00000494028 ZBED5Q49AG3 693 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 COLEC12Q5KU26 742 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 MANEAQ5SRI9 462 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 XAF1Q6GPH4 301 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 HEPHL1Q6MZM0 1159 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 TCTN3Q6NUS6 607 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 Q6ZPB1 254 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-208ENST00000494028 HMGN2P46Q86SG4 172 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 TSPYL5Q86VY4 417 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-208ENST00000494028 RBM45Q8IUH3 476 aaKnown RBP9.99□□□□□ -0.81
CLCN6-208ENST00000494028 TAGAPQ8N103 731 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 PARP8Q8N3A8 854 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 AQP11Q8NBQ7 271 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 OR52J3Q8NH60 311 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 PHF10Q8WUB8 498 aaKnown RBP9.99□□□□□ -0.81
CLCN6-208ENST00000494028 NMD3Q96D46 503 aaKnown RBP9.99□□□□□ -0.81
CLCN6-208ENST00000494028 HRASLS5Q96KN8 279 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 FEVQ99581 238 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 ARHGDIGQ99819 225 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 ACTRT3Q9BYD9 372 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 MIR1-1HGQ9H1L0 117 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 ADNPQ9H2P0 1102 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 NMNAT1Q9HAN9 279 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-208ENST00000494028 GIN1Q9NXP7 522 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 PTGFRNQ9P2B2 879 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 RHCGQ9UBD6 479 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 FTSJ1Q9UET6 329 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 RSL24D1Q9UHA3 163 aaKnown RBP9.99□□□□□ -0.81
CLCN6-208ENST00000494028 PSME2Q9UL46 239 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 FAM32AQ9Y421 112 aaKnown RBP9.99□□□□□ -0.81
CLCN6-208ENST00000494028 PCDHGA6Q9Y5G7 932 aa9.99□□□□□ -0.81
CLCN6-208ENST00000494028 A0A0G2JPF8 293 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 SLC9B1P1A6NJY1 282 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 HNRNPCL2B2RXH8 293 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 HNRNPCL3B7ZW38 293 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 H3BSA7 217 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 SYT5O00445 386 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 FAAHO00519 579 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 PCDH17O14917 1159 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 CASC3O15234 703 aaKnown RBP9.98□□□□□ -0.81
CLCN6-208ENST00000494028 AQP9O43315 295 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 XPNPEP2O43895 674 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 NME6O75414 186 aaPredicted RBP9.98□□□□□ -0.81
CLCN6-208ENST00000494028 SERPINB7O75635 380 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 PIAS2O75928 621 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 ADAP00813 363 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 ATP1B1P05026 303 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 ALPPP05187 535 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 H1F0P07305 194 aaKnown RBP9.98□□□□□ -0.81
CLCN6-208ENST00000494028 HNRNPCL4P0DMR1 293 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 GSSP48637 474 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 XKP51811 444 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 PDX1P52945 283 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 GFERP55789 205 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 ESRRGP62508 458 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 RPP38P78345 283 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms