RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 PLXND1Q9Y4D7 1925 aa23.23■■□□□ 1.31
SYNGAP1-206ENST00000479510 TCF20Q9UGU0 1960 aaKnown RBP23.23■■□□□ 1.31
SYNGAP1-206ENST00000479510 NCBP2P52298 156 aaKnown RBP eCLIP23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 ZIC1Q15915 447 aa23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 HSDL2Q6YN16 418 aa23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 MMAAQ8IVH4 418 aaKnown RBP23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 CELF2-AS1Q8N7Q2 184 aa23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 OR56A1Q8NGH5 318 aa23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 GPR151Q8TDV0 419 aa23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 SUSD6Q92537 303 aa23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 ZNF707Q96C28 371 aaPredicted RBP23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 BBS4Q96RK4 519 aa23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 SRRQ9GZT4 340 aa23.22■■□□□ 1.31
SYNGAP1-206ENST00000479510 CCNKO75909 580 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 NR2F6P10588 404 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 ACP2P11117 423 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 WNT4P56705 351 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 COMTD1Q86VU5 262 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 IQCF1Q8N6M8 205 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 TP53I13Q8NBR0 393 aaPredicted RBP23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 OR5D16Q8NGK9 328 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 TRMT61AQ96FX7 289 aaKnown RBP23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 PRRG3Q9BZD7 231 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 TXNL4BQ9NX01 149 aaKnown RBP23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 COL4A3Q01955 1670 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 PRODHO43272 600 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 LCMT2O60294 686 aaKnown RBP23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 EPHX1P07099 455 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 CLCNKAP51800 687 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 GPR50Q13585 617 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 TPBGQ13641 420 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 SLC9A5Q14940 896 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 PLK5Q496M5 336 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 ARMC4Q5T2S8 1044 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 LIPKQ5VXJ0 399 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 SLC36A4Q6YBV0 504 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 LAPTM4BQ86VI4 370 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 IQCHQ86VS3 1027 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 LINC01555Q8NAE3 123 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 OR6T1Q8NGN1 323 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 TMEM163Q8TC26 289 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 GNPDA2Q8TDQ7 276 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 ZNF486Q96H40 463 aaPredicted RBP23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 NELL2Q99435 816 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 TEX101Q9BY14 249 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 MCOLN1Q9GZU1 580 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 ANKRD19PQ9H560 264 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 FBXW2Q9UKT8 454 aa23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 EXOSC1Q9Y3B2 195 aaKnown RBP23.21■■□□□ 1.31
SYNGAP1-206ENST00000479510 PCCBP05166 539 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 KRT8P05787 483 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 CHRM4P08173 479 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 HTR3AP46098 478 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 MAN2A2P49641 1150 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 GAS1P54826 345 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 AGERQ15109 404 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 CARTPTQ16568 116 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 PIP5KL1Q5T9C9 394 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 ACSM5Q6NUN0 579 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 KIAA1143Q96AT1 154 aaPredicted RBP23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 EPPINO95925 133 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 TRAPPC2P0DI81 140 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 TRAPPC2BP0DI82 140 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 RAB28P51157 221 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 SCN1BQ07699 218 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 ZNF79Q15937 498 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 SNAPC1Q16533 368 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 XKRXQ6PP77 449 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 SZRD1Q7Z422 152 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 AMER3Q8N944 861 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 C17orf62Q9BQA9 187 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 TM7SF3Q9NS93 570 aa23.2■■□□□ 1.3
SYNGAP1-206ENST00000479510 RGS13O14921 159 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 SEC14L5O43304 696 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 FHP07954 510 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 ETV5P41161 510 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 SLC9A3P48764 834 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 ETV1P50549 477 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 TMEM44Q2T9K0 475 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 WSCD2Q2TBF2 565 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 GLYR1Q49A26 553 aaPredicted RBP23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 MINDY4Q4G0A6 757 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 RSBN1Q5VWQ0 802 aaPredicted RBP23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 SLC27A4Q6P1M0 643 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 ZNF793Q6ZN11 406 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 BCDIN3DQ7Z5W3 292 aaKnown RBP23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 NRARPQ7Z6K4 114 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 RAB43Q86YS6 212 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 LAX1Q8IWV1 398 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 TEX47Q8TBZ9 253 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 KCTD7Q96MP8 289 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 FERD3LQ96RJ6 166 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 LGR4Q9BXB1 951 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 KCNK12Q9HB15 430 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 CALML5Q9NZT1 146 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 MUTYHQ9UIF7 546 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 ZNF221Q9UK13 617 aa23.19■■□□□ 1.3
SYNGAP1-206ENST00000479510 CDRT1O95170 752 aa23.18■■□□□ 1.3
SYNGAP1-206ENST00000479510 TSPAN19P0C672 248 aa23.18■■□□□ 1.3
SYNGAP1-206ENST00000479510 RPS5P46782 204 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms