RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MR1Q95460 341 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF597Q96LX8 424 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 CCDC115Q96NT0 180 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 COMMD9Q9P000 198 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 ERVK-18Q9QC07 812 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF879B4DU55 563 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 TAPBPO15533 448 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 IDH3BO43837 385 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 NDUFV2P19404 249 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 TNFRSF1BP20333 461 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 SLC9A3P48764 834 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF41P51814 821 aaPredicted RBP13.08□□□□□ -0.32
BRAT1-203ENST00000467558 CD300LGQ6UXG3 332 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 OR6C4Q8NGE1 309 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 FAM174AQ8TBP5 190 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 ELSPBP1Q96BH3 223 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 DEFB126Q9BYW3 111 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 CENPMQ9NSP4 180 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 ACSS1Q9NUB1 689 aaPredicted RBP13.08□□□□□ -0.32
BRAT1-203ENST00000467558 UNC119BA6NIH7 251 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 POLR1CO15160 346 aaPredicted RBP13.07□□□□□ -0.32
BRAT1-203ENST00000467558 ENTPD6O75354 484 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 IFNA6P05013 189 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 JMJD7P0C870 316 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 EDNRAP25101 427 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 NSDHLQ15738 373 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 MOGQ16653 247 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF367Q7RTV3 350 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 FRS2Q8WU20 508 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 TP53I11O14683 189 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 PRAMEF2O60811 474 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 HBA1P69905 142 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 NKX3-2P78367 333 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 SGCBQ16585 318 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 RNASE12Q5GAN4 147 aaKnown RBP13.07□□□□□ -0.32
BRAT1-203ENST00000467558 HDDC2Q7Z4H3 204 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 OR9A2Q8NGT5 310 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 MACROD1Q9BQ69 325 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 STRADBQ9C0K7 418 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 TRNAU1APQ9NX07 287 aaKnown RBP13.07□□□□□ -0.32
BRAT1-203ENST00000467558 RIMS3Q9UJD0 308 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF222Q9UK12 451 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 ZFR2Q9UPR6 939 aaKnown RBP13.07□□□□□ -0.32
BRAT1-203ENST00000467558 SESN1Q9Y6P5 492 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 PROM1O43490 865 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 FZD6O60353 706 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 PEX11BO96011 259 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 RPS3AP61247 264 aaKnown RBP13.07□□□□□ -0.32
BRAT1-203ENST00000467558 SLC3A1Q07837 685 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 SNTA1Q13424 505 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 MICAQ29983 383 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF554Q86TJ5 538 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 MEIOBQ8N635 442 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 HSPBAP1Q96EW2 488 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 ERMAPQ96PL5 475 aaPredicted RBP13.07□□□□□ -0.32
BRAT1-203ENST00000467558 TMED9Q9BVK6 235 aa13.07□□□□□ -0.32
BRAT1-203ENST00000467558 TRAPPC13A5PLN9 417 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 PRRT4C9JH25 899 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CASC3O15234 703 aaKnown RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 MITFO75030 526 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 SLC5A12Q1EHB4 618 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 LRIT3Q3SXY7 679 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CBLL1Q75N03 491 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 FUNDC1Q8IVP5 155 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 YIPF7Q8N8F6 280 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 MFSD2AQ8NA29 543 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 LRR1Q96L50 414 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 ZFP3Q96NJ6 502 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 RBP7Q96R05 134 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 POLDIP3Q9BY77 421 aaKnown RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 PCDHA9Q9Y5H5 950 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 MAP1BP46821 2468 aaKnown RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 VILLO15195 856 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CCNKO75909 580 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CDRT1O95170 752 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 RLN1P04808 185 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 ACSL1P33121 698 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 TGFBR2P37173 567 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 MAP3K8P41279 467 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 VLDLRP98155 873 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CAMK1Q14012 370 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 PUS10Q3MIT2 529 aaKnown RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 XKR5Q6UX68 686 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 LILRA3Q8N6C8 439 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 OR5L2Q8NGL0 311 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 HPS1Q92902 700 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 MSANTD3Q96H12 275 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 MGLLQ99685 303 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 ALOXE3Q9BYJ1 711 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 HOXD1Q9GZZ0 328 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 TUBB1Q9H4B7 451 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 SH3D21A4FU49 640 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 SOX1O00570 391 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 JRKO75564 520 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 RPP14O95059 124 aaKnown RBP13.06□□□□□ -0.32
BRAT1-203ENST00000467558 OSMP13725 252 aa13.06□□□□□ -0.32
BRAT1-203ENST00000467558 CCR2P41597 374 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms