RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 SOX18P35713 384 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 ID2Q02363 134 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 FOXD4Q12950 439 aaPredicted RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 COL9A2Q14055 689 aaPredicted RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 ELOCQ15369 112 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 ZNF628Q5EBL2 1059 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 GPR107Q5VW38 600 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 CWF19L1Q69YN2 538 aaKnown RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 ZNF770Q6IQ21 691 aaPredicted RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 MFSD12Q6NUT3 480 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 FAM111BQ6SJ93 734 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 DEF8Q6ZN54 512 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 PRSS41Q7RTY9 318 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 HMGN2P46Q86SG4 172 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 IQCHQ86VS3 1027 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 GKN2Q86XP6 184 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 MCATQ8IVS2 390 aaKnown RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 TAGAPQ8N103 731 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 ZNF655Q8N720 491 aaPredicted RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 AQP11Q8NBQ7 271 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 TMEM52Q8NDY8 209 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 CADM4Q8NFZ8 388 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 OR5T3Q8NGG3 340 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 OR13F1Q8NGS4 319 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 PHF10Q8WUB8 498 aaKnown RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 MUL1Q969V5 352 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 ISOC1Q96CN7 298 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 SHDQ96IW2 340 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 CNDP2Q96KP4 475 aaKnown RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 NODALQ96S42 347 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 NELL2Q99435 816 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 FUZQ9BT04 418 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 BTBD2Q9BX70 525 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 PINK1Q9BXM7 581 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 LHPPQ9H008 270 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 DUSP21Q9H596 190 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 LIN28AQ9H9Z2 209 aaKnown RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 NMNAT1Q9HAN9 279 aaPredicted RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 EQTNQ9NQ60 294 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 GIN1Q9NXP7 522 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 FBXL21Q9UKT6 434 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 ACAD8Q9UKU7 415 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 LIPT1Q9Y234 373 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 TPRKBQ9Y3C4 175 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 SNX5Q9Y5X3 404 aa9.23□□□□□ -0.93
ATF3-207ENST00000464547 MDC1Q14676 2089 aaKnown RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 LAMA2P24043 3122 aaKnown RBP9.23□□□□□ -0.93
ATF3-207ENST00000464547 SLC9B1P1A6NJY1 282 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 FAM227AF5H4B4 570 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 SGK494L7N484 410 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 M0R3H8 397 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 FAAHO00519 579 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 CYR61O00622 381 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 PCDHGA12O60330 932 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 TRMUO75648 421 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 UBXN7O94888 489 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 LGI1O95970 557 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 GASTP01350 101 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 PORP16435 677 aaPredicted RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 ITIH1P19827 911 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 PCMT1P22061 227 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 CDH3P22223 829 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 ELAVL4P26378 380 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 DCKP27707 260 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 SH3BGRP55822 239 aaPredicted RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 SMIM11AP58511 58 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 RACK1P63244 317 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 SHC2P98077 582 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 ROR2Q01974 943 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 CHRNEQ04844 493 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 TUBA3CQ13748 450 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 SEC23BQ15437 767 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 NPTX1Q15818 432 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 SMN1Q16637 294 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 FAM214AQ32MH5 1076 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 FGD3Q5JSP0 725 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 EXOSC6Q5RKV6 272 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 DCST1Q5T197 706 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 FHL5Q5TD97 284 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 GTF2IRD2BQ6EKJ0 949 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 HEPHL1Q6MZM0 1159 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 CDC73Q6P1J9 531 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 WDR53Q7Z5U6 358 aaPredicted RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 GTF2IRD2Q86UP8 949 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 ERI1Q8IV48 349 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 ENTHD1Q8IYW4 607 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 GJD3Q8N144 294 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 SIX5Q8N196 739 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 OR2L13Q8N349 312 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 PARP8Q8N3A8 854 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 ARHGEF39Q8N4T4 335 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 DNAJC22Q8N4W6 341 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 C19orf47Q8N9M1 422 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 AVL9Q8NBF6 648 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 ADAMTS15Q8TE58 950 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 DOK4Q8TEW6 326 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 GTPBP3Q969Y2 492 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
ATF3-207ENST00000464547 C12orf43Q96C57 262 aaKnown RBP9.22□□□□□ -0.93
ATF3-207ENST00000464547 MS4A4EQ96PG1 132 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms