RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 VSTM2BA6NLU5 285 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 CLCA1A8K7I4 914 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 IQCF5A8MTL0 148 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 E5RI56 91 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 SYT5O00445 386 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 DNALI1O14645 258 aaPredicted RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 DSCR3O14972 297 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 SLC16A5O15375 505 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 TTI1O43156 1089 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 PRPF4O43172 522 aaKnown RBP eCLIP4.02□□□□□ -1.77
CNN3-204ENST00000461018 ZBTB14O43829 449 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 CD5LO43866 347 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 GPRIN2O60269 458 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 NIPSNAP2O75323 286 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 VPS26AO75436 327 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 HAUS5O94927 633 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 SOX30O94993 753 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 HPP00738 406 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 C8GP07360 202 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 COX6A1P12074 109 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 EZRP15311 586 aaKnown RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 CHRM3P20309 590 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 MAGP20916 626 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 CCND1P24385 295 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 IVDP26440 423 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 CMPK1P30085 196 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 PEBP1P30086 187 aaKnown RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 GRIA3P42263 894 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 RGS4P49798 205 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 EFNA3P52797 238 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 AP1S2P56377 157 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 CTXN1P60606 82 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 EEF1A2Q05639 463 aaKnown RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 PRDX1Q06830 199 aaKnown RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 FASTKQ14296 549 aaKnown RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 CRYMQ14894 314 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 BRD3Q15059 726 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 PPP1R7Q15435 360 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 SPANXN3Q5MJ09 141 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 GARNL3Q5VVW2 1013 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 ANKRD22Q5VYY1 191 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 ZNF470Q6ECI4 717 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 TMEM211Q6ICI0 200 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 ZNF425Q6IV72 752 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 FIGLAQ6QHK4 219 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 C12orf54Q6X4T0 127 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 IL17RELQ6ZVW7 336 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 CYS1Q717R9 158 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 RNF44Q7L0R7 432 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 GALNTL5Q7Z4T8 443 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 WDR53Q7Z5U6 358 aaPredicted RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 PRUNE1Q86TP1 453 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 PDIK1LQ8N165 341 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 KRT222Q8N1A0 295 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 BEST3Q8N1M1 668 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 OTUD6BQ8N6M0 293 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 GPATCH11Q8N954 259 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 TTC29Q8NA56 475 aaPredicted RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 RELL2Q8NC24 303 aaPredicted RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 BBOF1Q8ND07 529 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 OR2L3Q8NG85 312 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 OR5M9Q8NGP3 310 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 OR9A1PQ8NGU1 263 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 LKAAEAR1Q8TD35 194 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 FAM222BQ8WU58 562 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 NAT14Q8WUY8 206 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 PDLIM5Q96HC4 596 aaKnown RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 MS4A14Q96JA4 679 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 CLPTM1LQ96KA5 538 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 SECISBP2Q96T21 854 aaKnown RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 PIGQQ9BRB3 760 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 DUSP26Q9BV47 211 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 XKR8Q9H6D3 395 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 UNKLQ9H9P5 680 aaKnown RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 TXLNGQ9NUQ3 528 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 NSMCE4AQ9NXX6 385 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 TAS2R13Q9NYV9 303 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 FAM30AQ9NZY2 134 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 FBXO5Q9UKT4 447 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 CDC14AQ9UNH5 594 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 FAM215AQ9Y5M1 114 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 SAR1BQ9Y6B6 198 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 MAD1L1Q9Y6D9 718 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 ALPK2Q86TB3 2170 aa4.02□□□□□ -1.77
CNN3-204ENST00000461018 YLPM1P49750 1951 aaKnown RBP4.02□□□□□ -1.77
CNN3-204ENST00000461018 VWFP04275 2813 aa4.01□□□□□ -1.77
CNN3-204ENST00000461018 A0A1W2PPV9 198 aa4.01□□□□□ -1.77
CNN3-204ENST00000461018 HYKKA2RU49 373 aa4.01□□□□□ -1.77
CNN3-204ENST00000461018 A8MUI8 341 aa4.01□□□□□ -1.77
CNN3-204ENST00000461018 A8MV72 311 aaPredicted RBP4.01□□□□□ -1.77
CNN3-204ENST00000461018 ARHGEF33A8MVX0 844 aa4.01□□□□□ -1.77
CNN3-204ENST00000461018 KDM4EB2RXH2 506 aaPredicted RBP4.01□□□□□ -1.77
CNN3-204ENST00000461018 IDSB3KWA1 339 aa4.01□□□□□ -1.77
CNN3-204ENST00000461018 E7ENX8 843 aa4.01□□□□□ -1.77
CNN3-204ENST00000461018 E7ESA3 106 aa4.01□□□□□ -1.77
CNN3-204ENST00000461018 EIF3HO15372 352 aaKnown RBP eCLIP4.01□□□□□ -1.77
CNN3-204ENST00000461018 PEX1O43933 1283 aa4.01□□□□□ -1.77
CNN3-204ENST00000461018 CDC40O60508 579 aaKnown RBP eCLIP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms