RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ING1Q9UK53 422 aaPredicted RBP8.93□□□□□ -0.98
SYNPO2-204ENST00000448416 ZFR2Q9UPR6 939 aaKnown RBP8.93□□□□□ -0.98
SYNPO2-204ENST00000448416 PCDHB1Q9Y5F3 818 aa8.93□□□□□ -0.98
SYNPO2-204ENST00000448416 NPTNQ9Y639 398 aa8.93□□□□□ -0.98
SYNPO2-204ENST00000448416 GSAPA4D1B5 854 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SDC3O75056 442 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SLC25A14O95258 325 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SIX6O95475 246 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ANXA5P08758 320 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 RAB3BP20337 219 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 PCSK1P29120 753 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 OR1E1P30953 314 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 CAPZA2P47755 286 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 RAB13P51153 203 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 TTC3P53804 2025 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 PUM1Q14671 1186 aaKnown RBP eCLIP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SWI5Q1ZZU3 235 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 BTN2A1Q7KYR7 527 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 FAM26EQ8N5C1 309 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 MRPS24Q96EL2 167 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 RNFT2Q96EX2 444 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 NKX6-2Q9C056 277 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ZSCAN32Q9NX65 697 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 EMC3Q9P0I2 261 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ZNF593O00488 134 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 MID1O15344 667 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SLC28A2O43868 658 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 RP2O75695 350 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 UGT2B7P16662 529 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ATP5A1P25705 553 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 XKR6Q5GH73 641 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 MS4A13Q5J8X5 152 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 DCST1Q5T197 706 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SPOUT1Q5T280 376 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 TMPRSS9Q7Z410 1059 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 TRMT11Q7Z4G4 463 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 OR56B4Q8NH76 319 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ZDHHC1Q8WTX9 485 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 GTF3C2Q8WUA4 911 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 CNOT9Q92600 299 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 UPF1Q92900 1129 aaKnown RBP eCLIP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 FOXJ1Q92949 421 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 IGSF8Q969P0 613 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ZFP42Q96MM3 310 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ZNF582Q96NG8 517 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ARHGAP9Q9BRR9 750 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SYT17Q9BSW7 474 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SPATA5L1Q9BVQ7 753 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ACTR6Q9GZN1 396 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 PITHD1Q9GZP4 211 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ARL15Q9NXU5 204 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 PRKAB1Q9Y478 270 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SRPRAP08240 638 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 PRPH2P23942 346 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 RBMS1P29558 406 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 CD79BP40259 229 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 RFX3P48380 749 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 RAG2P55895 527 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 CDK6Q00534 326 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SP140Q13342 867 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 DDX39BQ13838 428 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SLC36A2Q495M3 483 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 PYHIN1Q6K0P9 492 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ZNF852Q6ZMS4 543 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 OAFQ86UD1 273 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 MCATQ8IVS2 390 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 CLDN19Q8N6F1 224 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 WDR20Q8TBZ3 569 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 UBTD2Q8WUN7 234 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ZBED3Q96IU2 234 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SPATC1LQ9H0A9 340 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 DNTTIP1Q9H147 329 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 R3HDMLQ9H3Y0 253 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 ZNF282Q9UDV7 671 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 KCNK7Q9Y2U2 307 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 SLC6A5Q9Y345 797 aa8.92□□□□□ -0.98
SYNPO2-204ENST00000448416 PLSCR5A0PG75 271 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 PQLC2LA1A4F0 135 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 PRAMEF11O60813 436 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 MT-ND4P03905 459 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 ALPIP09923 528 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 ZNF7P17097 686 aaPredicted RBP8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 EPORP19235 508 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 MAPKAPK2P49137 400 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 TAP2Q03519 686 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 DSC1Q08554 894 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 ATP13A5Q4VNC0 1218 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 HACD4Q5VWC8 232 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 SLC27A4Q6P1M0 643 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 GPR26Q8NDV2 337 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 LKAAEAR1Q8TD35 194 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 ZFP3Q96NJ6 502 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 NMUR1Q9HB89 426 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 MGAT4CQ9UBM8 478 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 BTNL2Q9UIR0 455 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 PCDHGC4Q9Y5F7 938 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 LOC285556D6RIA3 1793 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 MCRIP1C9JLW8 97 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 H3BRB1 525 aa8.91□□□□□ -0.98
SYNPO2-204ENST00000448416 SH3BGRLO75368 114 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms