RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 RPLP0P05388 317 aaKnown RBP7.01□□□□□ -1.29
SYNE1-213ENST00000448038 FOLR3P41439 243 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 CDH11P55287 796 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 MS4A2Q01362 244 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 KCNAB2Q13303 367 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 GINS1Q14691 196 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 PYDC2Q56P42 97 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 TBC1D20Q96BZ9 403 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 DNAJA3Q96EY1 480 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 TRNT1Q96Q11 434 aaKnown RBP7.01□□□□□ -1.29
SYNE1-213ENST00000448038 ARHGAP9Q9BRR9 750 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 YTHDF1Q9BYJ9 559 aaKnown RBP7.01□□□□□ -1.29
SYNE1-213ENST00000448038 C1GALT1Q9NS00 363 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 CENPMQ9NSP4 180 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 KCMF1Q9P0J7 381 aa7.01□□□□□ -1.29
SYNE1-213ENST00000448038 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 GFYI3L273 518 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 TNFRSF1BP20333 461 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 GNALP38405 381 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 GPR143P51810 404 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 CSNK1G2P78368 415 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 DCTN2Q13561 401 aaKnown RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 BLMHQ13867 455 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 MEP1AQ16819 746 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 C14orf28Q4W4Y0 310 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 CRTC2Q53ET0 693 aaPredicted RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 ZNF440Q8IYI8 595 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 KLHL36Q8N4N3 616 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 OR6N1Q8NGY5 312 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 OR51A7Q8NH64 312 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 RDH12Q96NR8 316 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 COQ7Q99807 217 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 MS4A8Q9BY19 250 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 SEMA6CQ9H3T2 930 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 PISDQ9UG56 409 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 PCDHGB1Q9Y5G3 927 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 A0A1W2PPC4 97 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 DPPA5A6NC42 116 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 SORBS2O94875 1100 aaKnown RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 SNAP29O95721 258 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 GPR75O95800 540 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 AIFM1O95831 613 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 POU2F2P09086 479 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 GABRG2P18507 467 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 HK1P19367 917 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 SLC9A3P48764 834 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 PMS2P3Q13401 168 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 SPRED3Q2MJR0 410 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 GFOD2Q3B7J2 385 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 CPZQ66K79 652 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 SYT13Q7L8C5 426 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 TRIM46Q7Z4K8 759 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 UXS1Q8NBZ7 420 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 PSMA8Q8TAA3 256 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 C9orf43Q8TAL5 461 aaPredicted RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 ATOH1Q92858 354 aaPredicted RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 HOXD1Q9GZZ0 328 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 ABCB10Q9NRK6 738 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 DNAJC27Q9NZQ0 273 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 DICER1Q9UPY3 1922 aaKnown RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 MICAL3Q7RTP6 2002 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 PSME4Q14997 1843 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 EFCAB7A8K855 629 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 C11orf98E9PRG8 122 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 ASNA1O43681 348 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 NR2C1P13056 603 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 PCGF2P35227 344 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 GBX2P52951 348 aaPredicted RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 CDH15P55291 814 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 IL18R1Q13478 541 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 TLR1Q15399 786 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 TIGD6Q17RP2 521 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 EEF1AKMT2Q5JPI9 291 aaKnown RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 TMEM225Q6GV28 225 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 ASB15Q8WXK1 588 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 GTF2H4Q92759 462 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 HSPBAP1Q96EW2 488 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 MRGPRX3Q96LB0 322 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 ADAD1Q96M93 576 aaKnown RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 POLDIP3Q9BY77 421 aaKnown RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 KAT8Q9H7Z6 458 aaKnown RBP7□□□□□ -1.29
SYNE1-213ENST00000448038 MARCH7Q9H992 704 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 SCN10AQ9Y5Y9 1956 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 LOC285556D6RIA3 1793 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 A0A1W2PRG6 482 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 TLCD2A6NGC4 264 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 PLD2O14939 933 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 FESP07332 822 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 RETP07949 1114 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 CPMP14384 443 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 HBA1P69905 142 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 MXD1Q05195 221 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 VEZF1Q14119 521 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 CLCA4Q14CN2 919 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 DDI2Q5TDH0 399 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 Q7L0L9 218 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 GPAT4Q86UL3 456 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 SATL1Q86VE3 508 aa7□□□□□ -1.29
SYNE1-213ENST00000448038 ARL14Q8N4G2 192 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms