RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 MTFMTQ96DP5 389 aaKnown RBP8.12□□□□□ -1.11
USP6NL-203ENST00000443016 CDK15Q96Q40 435 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 NTMT1Q9BV86 223 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 WDR41Q9HAD4 459 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 SLCO1B3Q9NPD5 702 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 TRPS1Q9UHF7 1281 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 RNF11Q9Y3C5 154 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 CROCCQ5TZA2 2017 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 ARHGAP10A1A4S6 786 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 M0R3H8 397 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 PLPP1O14494 284 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 ITM2AO43736 263 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 HS6ST1O60243 411 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 FGF17O60258 216 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 CHRNGP07510 517 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 TSPAN8P19075 237 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 RAD52P43351 418 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 RPL14P50914 215 aaKnown RBP8.12□□□□□ -1.11
USP6NL-203ENST00000443016 SMSP52788 366 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 RNF4P78317 190 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 PLIN5Q00G26 463 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 FOLH1Q04609 750 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 GGTA1PQ4G0N0 100 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 RNFT1Q5M7Z0 435 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 GOLM1Q8NBJ4 401 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 PSD4Q8NDX1 1056 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 TANKQ92844 425 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 PPWD1Q96BP3 646 aaKnown RBP8.12□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF317Q96PQ6 595 aaPredicted RBP8.12□□□□□ -1.11
USP6NL-203ENST00000443016 RASL10BQ96S79 203 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 FAM107BQ9H098 131 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 GIMAP2Q9UG22 337 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 HAO1Q9UJM8 370 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 MAPRE3Q9UPY8 281 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 ATG4BQ9Y4P1 393 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 DCHS2Q6V1P9 2916 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 APCP25054 2843 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 TRPC5OSA6NMA1 111 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 AZIN1O14977 448 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ZNHIT1O43257 154 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 OR10H2O60403 315 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 OR6B1O95007 311 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 TGDSO95455 350 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 KRT6AP02538 564 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 KRT6BP04259 564 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 UROSP10746 265 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 KRT20P35900 424 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 SOX3P41225 446 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 GIPRP48546 466 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 KRT6CP48668 564 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 TNFRSF17Q02223 184 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 PLGLB1Q02325 96 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 TRAF3Q13114 568 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ODF1Q14990 250 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 C18orf63Q68DL7 685 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 SP5Q6BEB4 398 aaPredicted RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 C3P1Q6ZMU1 363 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 RPS27LQ71UM5 84 aaKnown RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 NUDT13Q86X67 352 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 SIAH3Q8IW03 269 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 CLYBLQ8N0X4 340 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 SLC34A3Q8N130 599 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 EID3Q8N140 333 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ZCCHC7Q8N3Z6 543 aaKnown RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF808Q8N4W9 903 aaPredicted RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF781Q8N8C0 355 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF321PQ8N8H1 164 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 OR52B6Q8NGF0 335 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 AGR3Q8TD06 166 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ITLN2Q8WWU7 325 aaPredicted RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 SENP5Q96HI0 755 aaPredicted RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 SORT1Q99523 831 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 CNPPD1Q9BV87 410 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 SHCBP1LQ9BZQ2 653 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 RUBCNLQ9H714 662 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ZBTB26Q9HCK0 441 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 PSD3Q9NYI0 1048 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 MARCOQ9UEW3 520 aaPredicted RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 SNX6Q9UNH7 406 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 GLOD5A6NK44 160 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 OR7A17O14581 309 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 HNRNPRO43390 633 aaKnown RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 PRKRAO75569 313 aaKnown RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 PDE9AO76083 593 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 OR4F21O95013 312 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ETHE1O95571 254 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 GBAP04062 536 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 PTGS2P35354 604 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ARFIP1P53367 373 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 CBX1P83916 185 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 IFT88Q13099 833 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 BIKQ13323 160 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ART3Q13508 389 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 CUL3Q13618 768 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 BRICD5Q6PL45 260 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 XKRXQ6PP77 449 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 OPN5Q6U736 354 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 GPALPP1Q8IXQ4 340 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 L3MBTL4Q8NA19 623 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 OR4F6Q8NGB9 312 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms