RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 OR5T3Q8NGG3 340 aa16.32■□□□□ 0.2
TVP23C-204ENST00000438826 CNIH3Q8TBE1 160 aa16.32■□□□□ 0.2
TVP23C-204ENST00000438826 ZNF566Q969W8 418 aa16.32■□□□□ 0.2
TVP23C-204ENST00000438826 HRASLS5Q96KN8 279 aa16.32■□□□□ 0.2
TVP23C-204ENST00000438826 NMNAT1Q9HAN9 279 aaPredicted RBP16.32■□□□□ 0.2
TVP23C-204ENST00000438826 PTGFRNQ9P2B2 879 aa16.32■□□□□ 0.2
TVP23C-204ENST00000438826 RSL24D1Q9UHA3 163 aaKnown RBP16.32■□□□□ 0.2
TVP23C-204ENST00000438826 KCNE3Q9Y6H6 103 aa16.32■□□□□ 0.2
TVP23C-204ENST00000438826 LMO7DNF2Z398 122 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 KIF1CO43896 1103 aaKnown RBP16.31■□□□□ 0.2
TVP23C-204ENST00000438826 ABCB7O75027 752 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 DEFB110Q30KQ9 67 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 MFSD12Q6NUT3 480 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 OLIG3Q7RTU3 272 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 C17orf82Q86X59 251 aaPredicted RBP16.31■□□□□ 0.2
TVP23C-204ENST00000438826 CA13Q8N1Q1 262 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 BPIFB6Q8NFQ5 453 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 OR9Q2Q8NGE9 314 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 VANGL1Q8TAA9 524 aaPredicted RBP16.31■□□□□ 0.2
TVP23C-204ENST00000438826 ADAMTS15Q8TE58 950 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 TANKQ92844 425 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 TCTN2Q96GX1 697 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 TRNT1Q96Q11 434 aaKnown RBP16.31■□□□□ 0.2
TVP23C-204ENST00000438826 NIPSNAP1Q9BPW8 284 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 ANKHQ9HCJ1 492 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 VCX3AQ9NNX9 186 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 CALML5Q9NZT1 146 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 SGK494L7N484 410 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 SRPX2O60687 465 aaPredicted RBP16.31■□□□□ 0.2
TVP23C-204ENST00000438826 GPR75O95800 540 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 ANGPTL1O95841 491 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 AGR2O95994 175 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 TTKP33981 857 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 PEX19P40855 299 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 CXCL12P48061 93 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 CXCR4P61073 352 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 SHC2P98077 582 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 PMS2P3Q13401 168 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 COL9A2Q14055 689 aaPredicted RBP16.31■□□□□ 0.2
TVP23C-204ENST00000438826 DEFB133Q30KQ1 61 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 FAM111BQ6SJ93 734 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 DEF8Q6ZN54 512 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 OR4D11Q8NGI4 311 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 DHRS1Q96LJ7 313 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 GUCD1Q96NT3 240 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 MAP3K3Q99759 626 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 GIN1Q9NXP7 522 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 CLCA2Q9UQC9 943 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 SLC9A8Q9Y2E8 581 aa16.31■□□□□ 0.2
TVP23C-204ENST00000438826 CASC3O15234 703 aaKnown RBP16.3■□□□□ 0.2
TVP23C-204ENST00000438826 FGF17O60258 216 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 LDB3O75112 727 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 SEMA7AO75326 666 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 CPNE6O95741 557 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 ATP1B1P05026 303 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 FUT4P22083 530 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 CSNK1EP49674 416 aaKnown RBP16.3■□□□□ 0.2
TVP23C-204ENST00000438826 NUP107P57740 925 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 SMIM11AP58511 58 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 ID2Q02363 134 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 FAM214AQ32MH5 1076 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 ZNF628Q5EBL2 1059 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 CDC73Q6P1J9 531 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 B3GNT6Q6ZMB0 384 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 C16orf62Q7Z3J2 963 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 RBM45Q8IUH3 476 aaKnown RBP16.3■□□□□ 0.2
TVP23C-204ENST00000438826 ARHGEF39Q8N4T4 335 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 DNAJC22Q8N4W6 341 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 TUBA1CQ9BQE3 449 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 PINK1Q9BXM7 581 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 PTTG2Q9NZH5 202 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 ACAD8Q9UKU7 415 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 TMCC3Q9ULS5 477 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 CCDC88CQ9P219 2028 aa16.3■□□□□ 0.2
TVP23C-204ENST00000438826 LGI1O95970 557 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 H1F0P07305 194 aaKnown RBP16.29■□□□□ 0.2
TVP23C-204ENST00000438826 CTSBP07858 339 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 JUNBP17275 347 aaPredicted RBP16.29■□□□□ 0.2
TVP23C-204ENST00000438826 BCKDHBP21953 392 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 CBLP22681 906 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 RGS19P49795 217 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 RAB39AQ14964 217 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 MAD2L1BPQ15013 274 aaPredicted RBP16.29■□□□□ 0.2
TVP23C-204ENST00000438826 NEDD8Q15843 81 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 PRTGQ2VWP7 1150 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 PROX2Q3B8N5 592 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 OGFOD3Q6PK18 319 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 FAM92BQ6ZTR7 304 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 B3GNT8Q7Z7M8 397 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 COMTD1Q86VU5 262 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 LACC1Q8IV20 430 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 CCDC71Q8IV32 467 aaPredicted RBP16.29■□□□□ 0.2
TVP23C-204ENST00000438826 UBALD2Q8IYN6 164 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 ALDH16A1Q8IZ83 802 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 SPARTQ8N0X7 666 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 AQP11Q8NBQ7 271 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 TMEM52Q8NDY8 209 aa16.29■□□□□ 0.2
TVP23C-204ENST00000438826 DNASE2BQ8WZ79 361 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms