RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 RALAP11233 206 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 CYP11B1P15538 503 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 DESP17661 470 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 PRDX2P32119 198 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 TRIM23P36406 574 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 SLC1A4P43007 532 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 RAG2P55895 527 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 CDKL1Q00532 357 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 EMC2Q15006 297 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 INAQ16352 499 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 HKDC1Q2TB90 917 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 UNC50Q53HI1 259 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 DNAJC21Q5F1R6 531 aaKnown RBP2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 C9orf66Q5T8R8 295 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 FAM159AQ6UWV7 190 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 UNC5DQ6UXZ4 953 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 TIPARPQ7Z3E1 657 aaKnown RBP2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 NUFIP2Q7Z417 695 aaKnown RBP2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 COLGALT1Q8NBJ5 622 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 CSNK1G2-AS1Q8NCQ2 148 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 OR1K1Q8NGR3 316 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 CCDC110Q8TBZ0 833 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 U2AF1L4Q8WU68 220 aaKnown RBP2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 P3H4Q92791 437 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 PNPLA2Q96AD5 504 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 C14orf79Q96F83 325 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 ACCSQ96QU6 501 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 CCDC28BQ9BUN5 200 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 DCTPP1Q9H773 170 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 ROPN1Q9HAT0 212 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 TAS2R16Q9NYV7 291 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 MIOXQ9UGB7 285 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 SPATA2Q9UM82 520 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 FBXO7Q9Y3I1 522 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 ZNF175Q9Y473 711 aa2.92□□□□□ -1.94
TRAPPC13-204ENST00000438419 GON4LQ3T8J9 2241 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 AFF2P51816 1311 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 IGHV3-16A0A0C4DH30 117 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 TSPAN2O60636 221 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 FRAT2O75474 233 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 HPP00738 406 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 IFNB1P01574 187 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 OR9G9P0C7N8 305 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 FUT1P19526 365 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 DNAJB1P25685 340 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 CALML3P27482 149 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 HPDP32754 393 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 SPRP35270 261 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 MATKP42679 507 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 MAGEA4P43358 317 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 SLC6A8P48029 635 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 GSK3BP49841 420 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 GPC3P51654 580 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 NDST1P52848 882 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 MTTPP55157 894 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 HTD2P86397 168 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 ZFP36L1Q07352 338 aaKnown RBP2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 ITPK1Q13572 414 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 SNX1Q13596 522 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 PDIA5Q14554 519 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 ZNF528Q3MIS6 628 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 HSP90AA5PQ58FG0 334 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 C12orf60Q5U649 245 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 AGAP7PQ5VUJ5 663 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 SPINK14Q6IE38 97 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 OLFM4Q6UX06 510 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 LRRC49Q8IUZ0 686 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 SLC39A11Q8N1S5 342 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 PYROXD2Q8N2H3 581 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 RNF148Q8N7C7 305 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 ZNF781Q8N8C0 355 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 BEST4Q8NFU0 473 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 OR4F5Q8NH21 305 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 SELENOMQ8WWX9 145 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 C16orf45Q96MC5 204 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 FAM124BQ9H5Z6 455 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 NT5DC2Q9H857 520 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 YAE1D1Q9NRH1 226 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 BCAP29Q9UHQ4 241 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 IKZF3Q9UKT9 509 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 ZNF346Q9UL40 294 aaKnown RBP2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 AURKCQ9UQB9 309 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 SLC9A8Q9Y2E8 581 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 KLHDC2Q9Y2U9 406 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 SMAD5-AS1Q9Y6J3 95 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 STYXL1Q9Y6J8 313 aa2.91□□□□□ -1.94
TRAPPC13-204ENST00000438419 ABCC4O15439 1325 aa2.9□□□□□ -1.94
TRAPPC13-204ENST00000438419 ZMYM6O95789 1325 aa2.9□□□□□ -1.94
TRAPPC13-204ENST00000438419 FAM205AQ6ZU69 1335 aa2.9□□□□□ -1.94
TRAPPC13-204ENST00000438419 NOTCH2Q04721 2471 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 A0A1B0GTH9 108 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 TRIM49BA6NDI0 452 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 LGALS8O00214 317 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 ARPC1BO15143 372 aaKnown RBP2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 SH3BGRLO75368 114 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 SCGB2A1O75556 95 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 GSTA1P08263 222 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 FOLR2P14207 255 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 PTPN4P29074 926 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms