RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 C8orf59Q8N0T1 100 aaPredicted RBP18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 SIMC1Q8NDZ2 872 aa18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 GIPC3Q8TF64 312 aa18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 ANKRD9Q96BM1 317 aaPredicted RBP18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 ZNF354BQ96LW1 612 aa18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 MS4A4EQ96PG1 132 aa18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 DDX18Q9NVP1 670 aaKnown RBP18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 PTGFRNQ9P2B2 879 aa18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 SEC14L3Q9UDX4 400 aa18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 PLCL2Q9UPR0 1127 aa18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 NINQ8N4C6 2090 aa18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 TECTAO75443 2155 aa18.02■□□□□ 0.48
RAB3IP-205ENST00000417413 E9PQ18 207 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 NME6O75414 186 aaPredicted RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 ATP1B1P05026 303 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 PABPC4LP0CB38 370 aaKnown RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 FUT4P22083 530 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 ALDH4A1P30038 563 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 HOXD12P35452 270 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 CDH12P55289 794 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 CDH15P55291 814 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 PLK5Q496M5 336 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 COMTD1Q86VU5 262 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 SLC35F3Q8IY50 421 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 OR4D11Q8NGI4 311 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 NCSTNQ92542 709 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 PROX1Q92786 737 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 SLC35A4Q96G79 324 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 CD180Q99467 661 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 BTBD2Q9BX70 525 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 GIN1Q9NXP7 522 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 KCND3Q9UK17 655 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 FAM32AQ9Y421 112 aaKnown RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 PCDHGA8Q9Y5G5 932 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 A0A0A6YYC8 382 aaPredicted RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 I3L1I5 382 aaPredicted RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 FFAR1O14842 300 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 NUDT21O43809 227 aaKnown RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 AVPR2P30518 371 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 MLLT3P42568 568 aaPredicted RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 CLK3P49761 638 aaKnown RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 OR1D5P58170 312 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 TUBA4AP68366 448 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 IL18R1Q13478 541 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 MICAQ29983 383 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 EXOC3L2Q2M3D2 409 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 GPAT3Q53EU6 434 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 EXOSC6Q5RKV6 272 aaKnown RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 ZNF691Q5VV52 312 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 HEPHL1Q6MZM0 1159 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 CDC73Q6P1J9 531 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 SATL1Q86VE3 508 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 TTC29Q8NA56 475 aaPredicted RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 ATG16L2Q8NAA4 619 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 ZDHHC12Q96GR4 267 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 ZC3H10Q96K80 434 aaKnown RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 WFDC6Q9BQY6 131 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 GRIP2Q9C0E4 1043 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 KRT84Q9NSB2 600 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 C19orf53Q9UNZ5 99 aaPredicted RBP18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 LIPT1Q9Y234 373 aa18.01■□□□□ 0.47
RAB3IP-205ENST00000417413 DSPPQ9NZW4 1301 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 IGHV1OR21-1A0A087WYE8 117 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 UGT2B11O75310 529 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 SEMA7AO75326 666 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 EPPINO95925 133 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 IFI6P09912 130 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 ELK4P28324 431 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 ARRB1P49407 418 aaPredicted RBP18■□□□□ 0.47
RAB3IP-205ENST00000417413 NR1H2P55055 460 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 MGAT2Q10469 447 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 SRSF5Q13243 272 aaKnown RBP18■□□□□ 0.47
RAB3IP-205ENST00000417413 FAM53BQ14153 422 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 NDUFA9Q16795 377 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 INAVAQ3KP66 663 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 TRMT12Q53H54 448 aaKnown RBP18■□□□□ 0.47
RAB3IP-205ENST00000417413 SLC5A8Q8N695 610 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 OR52J3Q8NH60 311 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 TRNT1Q96Q11 434 aaKnown RBP18■□□□□ 0.47
RAB3IP-205ENST00000417413 ELF4Q99607 663 aaPredicted RBP18■□□□□ 0.47
RAB3IP-205ENST00000417413 PSD2Q9BQI7 771 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 SPATA5L1Q9BVQ7 753 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 SLC38A1Q9H2H9 487 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 EPB41L1Q9H4G0 881 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 RIBC2Q9H4K1 309 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 PDE7BQ9NP56 450 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 TUBA8Q9NY65 449 aaPredicted RBP18■□□□□ 0.47
RAB3IP-205ENST00000417413 KIF17Q9P2E2 1029 aa18■□□□□ 0.47
RAB3IP-205ENST00000417413 A0A087WV62 115 aa17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 BCKDKO14874 412 aa17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 BMP10O95393 424 aa17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 RYKP34925 604 aa17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 PPM1FP49593 454 aaPredicted RBP17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 ISL1P61371 349 aa17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 CFHR1Q03591 330 aa17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 GANABQ14697 944 aaKnown RBP17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 NR1D2Q14995 579 aa17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 PRICKLE4Q2TBC4 344 aa17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 CTU2Q2VPK5 515 aaKnown RBP17.99■□□□□ 0.47
RAB3IP-205ENST00000417413 NADK2Q4G0N4 442 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms