RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 MEX3BQ6ZN04 569 aaKnown RBP13.85□□□□□ -0.19
UBXN4-203ENST00000416538 SH2D5Q6ZV89 423 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 SEM1Q6ZVN7 128 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 PAGE2Q7Z2X7 111 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 LIX1LQ8IVB5 337 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 IFT20Q8IY31 132 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 DND1Q8IYX4 353 aaKnown RBP13.85□□□□□ -0.19
UBXN4-203ENST00000416538 EID3Q8N140 333 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 VWA5B2Q8N398 1253 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 SPPL2AQ8TCT8 520 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 CHTF18Q8WVB6 975 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 RND1Q92730 232 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 DIO2Q92813 273 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 TP53INP1Q96A56 240 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 CTHRC1Q96CG8 243 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 KLHL29Q96CT2 875 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 L3HYPDHQ96EM0 354 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 C11orf24Q96F05 449 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-203ENST00000416538 APIPQ96GX9 242 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 JSRP1Q96MG2 331 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-203ENST00000416538 SPOCK3Q9BQ16 436 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 TTYH2Q9BSA4 534 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 DOHHQ9BU89 302 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 UBQLN3Q9H347 655 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 TNFRSF12AQ9NP84 129 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 AHSPQ9NZD4 102 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 COQ3Q9NZJ6 369 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 CNIH4Q9P003 139 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 PSMC3IPQ9P2W1 217 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-203ENST00000416538 BOKQ9UMX3 212 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-203ENST00000416538 SNX6Q9UNH7 406 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 TIMM22Q9Y584 194 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 NPFFR2Q9Y5X5 522 aa13.85□□□□□ -0.19
UBXN4-203ENST00000416538 ANKHD1Q8IWZ3 2542 aaKnown RBP13.85□□□□□ -0.19
UBXN4-203ENST00000416538 A0A0G2JNJ9 132 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 G3V2L1 256 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 BCKDKO14874 412 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 SUSD5O60279 629 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 IL3P08700 152 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 NUDT7P0C024 238 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 PCSK2P16519 638 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 IMPDH1P20839 514 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 ABCD3P28288 659 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 CHRNB4P30926 498 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 TRPC1P48995 793 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 WNT3P56703 355 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 CSTF3Q12996 717 aaKnown RBP13.84□□□□□ -0.19
UBXN4-203ENST00000416538 SLC10A1Q14973 349 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 RASA2Q15283 850 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 PRSS53Q2L4Q9 553 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 SCIMPQ6UWF3 145 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 TAGAPQ8N103 731 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 LILRB4Q8NHJ6 448 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 ZNF597Q96LX8 424 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 RILPQ96NA2 401 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 BRINP2Q9C0B6 783 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 C12orf65Q9H3J6 166 aaKnown RBP13.84□□□□□ -0.19
UBXN4-203ENST00000416538 Q9UFV3 132 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 FETUBQ9UGM5 382 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 PLLPQ9Y342 182 aa13.84□□□□□ -0.19
UBXN4-203ENST00000416538 ANKRD33BA6NCL7 494 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 FIGNL2A6NMB9 653 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 ENO4A6NNW6 628 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 PCDH7O60245 1069 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 HCN1O60741 890 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 ABCB1P08183 1280 aaPredicted RBP13.83□□□□□ -0.2
UBXN4-203ENST00000416538 HSD3B1P14060 373 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 TAC1P20366 129 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 HSD3B2P26439 372 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 GDF1P27539 372 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 MSX1P28360 303 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 PTGDSP41222 190 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 ALDH9A1P49189 494 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 MAP4K2Q12851 820 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 LCP2Q13094 533 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 TRMT12Q53H54 448 aaKnown RBP13.83□□□□□ -0.2
UBXN4-203ENST00000416538 DCST1Q5T197 706 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 C1orf185Q5T7R7 199 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 TMEM211Q6ICI0 200 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 B3GNT6Q6ZMB0 384 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 C17orf47Q8NEP4 570 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 OR7G1Q8NGA0 311 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 NEIL3Q8TAT5 605 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 ACMSDQ8TDX5 336 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 ASB5Q8WWX0 329 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 HGDQ93099 445 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 NODALQ96S42 347 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 EBPLQ9BY08 206 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 LDAHQ9H6V9 325 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 ACKR4Q9NPB9 350 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 EHD3Q9NZN3 535 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 VPS29Q9UBQ0 182 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 MCM8Q9UJA3 840 aa13.83□□□□□ -0.2
UBXN4-203ENST00000416538 GOLGA6L10A6NI86 522 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 B4DXG7 233 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 KRT6AP02538 564 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 PROCP04070 461 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 KRT6BP04259 564 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 CSNK2A2P19784 350 aaPredicted RBP13.82□□□□□ -0.2
UBXN4-203ENST00000416538 HMOX2P30519 316 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms