RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 PROK2Q9HC23 129 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 ZFP64Q9NPA5 681 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 CHST11Q9NPF2 352 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 QPCTLQ9NXS2 382 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 EHD3Q9NZN3 535 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 UTS2RQ9UKP6 389 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 NINQ8N4C6 2090 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 NCKAP5O14513 1909 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 ADGRG4Q8IZF6 3080 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 LRRC3CA6NJW4 275 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 AQP7O14520 342 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 BCKDKO14874 412 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 HCN1O60741 890 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 PDE9AO76083 593 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 CLDN14O95500 239 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 CBX7O95931 251 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 UROSP10746 265 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 NAGAP17050 411 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 ABCD3P28288 659 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 HTR1EP28566 365 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 SOX18P35713 384 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 RPP38P78345 283 aaKnown RBP13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF763Q0D2J5 394 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 SLC10A1Q14973 349 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 CEBPEQ15744 281 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 EMC4Q5J8M3 183 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 WDR93Q6P2C0 686 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 EMBQ6PCB8 327 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 C3P1Q6ZMU1 363 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 HOMEZQ8IX15 550 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 FAM76AQ8TAV0 307 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 AENQ8WTP8 325 aaKnown RBP13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 HSPBAP1Q96EW2 488 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 APOPT1Q96IL0 206 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 SMC6Q96SB8 1091 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 TRMOQ9BU70 441 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 NXF5Q9H1B4 397 aaKnown RBP13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 GIMAP4Q9NUV9 329 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 LGALS13Q9UHV8 139 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 DTX4Q9Y2E6 619 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 WBP11Q9Y2W2 641 aaKnown RBP13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 PLLPQ9Y342 182 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 DCHS2Q6V1P9 2916 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 MYO9AB2RTY4 2548 aa13.67□□□□□ -0.22
SMIM11A-203ENST00000399299 NPIPB8E9PQR5 432 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 ACOX3O15254 700 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF500O60304 480 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 TRIM3O75382 744 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 CRCPO75575 148 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 RSL1D1O76021 490 aaKnown RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 ANXA4P09525 319 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 DCAF7P61962 342 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 DUSP8Q13202 625 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 PCLAFQ15004 111 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 EXOSC7Q15024 291 aaKnown RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 IMPG1Q17R60 797 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF628Q5EBL2 1059 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 SPDYAQ5MJ70 313 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 TMEM211Q6ICI0 200 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 TMEM81Q6P7N7 255 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 SCIMPQ6UWF3 145 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 TMEM64Q6YI46 380 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 RNF165Q6ZSG1 346 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 NCCRP1Q6ZVX7 275 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 TRABD2AQ86V40 505 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 TICAM1Q8IUC6 712 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 BANPQ8N9N5 519 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 ADCY4Q8NFM4 1077 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 OR2W6PQ8NHA6 318 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 SPPL2AQ8TCT8 520 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 DIO2Q92813 273 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 NTNG2Q96CW9 530 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 LCORQ96JN0 433 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF597Q96LX8 424 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 DOHHQ9BU89 302 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 ROPN1BQ9BZX4 212 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 IQCGQ9H095 443 aaKnown RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 C12orf65Q9H3J6 166 aaKnown RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 ROPN1Q9HAT0 212 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 TNFRSF12AQ9NP84 129 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 ACKR4Q9NPB9 350 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 RRAGDQ9NQL2 400 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 SLC35C2Q9NQQ7 365 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 B4GALT7Q9UBV7 327 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 PRODH2Q9UF12 536 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 BCAP29Q9UHQ4 241 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 HRH3Q9Y5N1 445 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 LIPGQ9Y5X9 500 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 TACC2O95359 2948 aa13.66□□□□□ -0.22
SMIM11A-203ENST00000399299 PKDREJQ9NTG1 2253 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 ATP6AP2A0A1C7CYW4 349 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 TLDC2A0PJX2 215 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 FIGNL2A6NMB9 653 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 NPIPA2E9PIF3 369 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 NPIPA3F8WFD2 350 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 TRIM13O60858 407 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 PPM1BO75688 479 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 ATP6AP2O75787 350 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 BCAS2O75934 225 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms