RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SOX30O94993 753 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LAMP2P13473 410 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NT5EP21589 574 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MTNR1AP48039 350 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 RAE1P78406 368 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 E2F2Q14209 437 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FAM26DQ5JW98 314 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SLC27A4Q6P1M0 643 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FAHD1Q6P587 224 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 VRK2Q86Y07 508 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NRMQ8IXM6 262 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TCEAL8Q8IYN2 117 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CDK20Q8IZL9 346 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OR8H3Q8N146 312 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SLC39A11Q8N1S5 342 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ADAMTS19Q8TE59 1207 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CHTF18Q8WVB6 975 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ZNF689Q96CS4 500 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MCHR1Q99705 422 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SPATA5L1Q9BVQ7 753 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 C11orf54Q9H0W9 315 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 IL21Q9HBE4 155 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TNFRSF10DQ9UBN6 386 aa13.62□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CABIN1Q9Y6J0 2220 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ZC3H12DA2A288 527 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SCN2BO60939 215 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 RAB36O95755 333 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 RPN2P04844 631 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 YES1P07947 543 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ALAS2P22557 587 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 GIPRP48546 466 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 DCDC1P59894 354 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SIM1P81133 766 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FCHO2Q0JRZ9 810 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LACC1Q8IV20 430 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FLCNQ8NFG4 579 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TAAR2Q9P1P5 351 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NEUROG3Q9Y4Z2 214 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 BRWD1Q9NSI6 2320 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FAM47E-STBD1D6RA91 191 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PGRMC2O15173 223 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SLC16A5O15375 505 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 EEF1E1O43324 174 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ABLIM3O94929 683 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 GKN3PP0CG01 181 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ADH5P11766 374 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 EPCAMP16422 314 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 DRD5P21918 477 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SOX18P35713 384 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MLIPQ5VWP3 458 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 KHDRBS2Q5VWX1 349 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PLBD1Q6P4A8 553 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ABI3BPQ7Z7G0 1075 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LRRC17Q8N6Y2 441 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PPP1R16AQ96I34 528 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LMLNQ96KR4 655 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MRPS30Q9NP92 439 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SPATA6Q9NWH7 488 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PADI2Q9Y2J8 665 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PLXNA1Q9UIW2 1896 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 A0A1W2PRG6 482 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ALPPP05187 535 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ARAFP10398 606 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PEPDP12955 493 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SOX9P48436 509 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 GZMMP51124 257 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CTBP2P56545 445 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NDUFA5Q16718 116 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 GGTA1PQ4G0N0 100 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HTR3DQ70Z44 454 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 AMER3Q8N944 861 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MED28Q9H204 178 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 C1GALT1Q9NS00 363 aa13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 RANBP2P49792 3224 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MYLKQ15746 1914 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 KCNE1BA0A087WTH5 132 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LOC105369274A0A096LPK9 316 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NOS1APO75052 506 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 GRPRP30550 384 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MC3RP41968 323 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MAP2K3P46734 347 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 DEFB134Q4QY38 66 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 C6orf132Q5T0Z8 1188 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ARTNQ5T4W7 220 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TCTN3Q6NUS6 607 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CDH24Q86UP0 819 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OR4N4Q8N0Y3 316 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 DNAJC5GQ8N7S2 189 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FAM98AQ8NCA5 519 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PLA2G15Q8NCC3 412 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ZSWIM3Q96MP5 696 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 C3orf14Q9HBI5 128 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HS3ST2Q9Y278 367 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PLPP1O14494 284 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ADAP00813 363 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 GCGRP47871 477 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SUZ12Q15022 739 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LARS2Q15031 903 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 DHCR24Q15392 516 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 KLHL22Q53GT1 634 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms