RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TAS2R10Q9NYW0 307 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 EXO1Q9UQ84 846 aaKnown RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 GOLGA6L19H0YKK7 550 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 CLOCKO15516 846 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 ICOSLGO75144 302 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 CBR3O75828 277 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 SCELO95171 688 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 CD8AP01732 235 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 ABCB1P08183 1280 aaPredicted RBP13.16□□□□□ -0.3
VAMP4-202ENST00000367740 GNAZP19086 355 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 ABCD3P28288 659 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 SSTR4P31391 388 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 IL2P60568 153 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 RPS13P62277 151 aaKnown RBP13.16□□□□□ -0.3
VAMP4-202ENST00000367740 TGM3Q08188 693 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 ZNF844Q08AG5 666 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 KCTD19Q17RG1 926 aaPredicted RBP13.16□□□□□ -0.3
VAMP4-202ENST00000367740 ARMC3Q5W041 872 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 SLC30A6Q6NXT4 461 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 VSTM4Q8IW00 320 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 LMNTD2Q8IXW0 634 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 SGMS2Q8NHU3 365 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 SFXN2Q96NB2 322 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 NODALQ96S42 347 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 NTMT1Q9BV86 223 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 ROGDIQ9GZN7 287 aa13.16□□□□□ -0.3
VAMP4-202ENST00000367740 RPF2Q9H7B2 306 aaKnown RBP13.16□□□□□ -0.3
VAMP4-202ENST00000367740 A0A0G2JK05 382 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 TCF21O43680 179 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 H2AFYO75367 372 aaKnown RBP13.15□□□□□ -0.3
VAMP4-202ENST00000367740 PRKRAO75569 313 aaKnown RBP13.15□□□□□ -0.3
VAMP4-202ENST00000367740 FTCDO95954 541 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 ITGA2P17301 1181 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 HIST1H1TP22492 207 aaPredicted RBP13.15□□□□□ -0.3
VAMP4-202ENST00000367740 SRD5A2P31213 254 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 NUDT6P53370 316 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 CLDN15P56746 228 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 NRG3P56975 720 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 CDK16Q00536 496 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 BIKQ13323 160 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 FGFBP1Q14512 234 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 SQLEQ14534 574 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 NRF1Q16656 503 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 CYP1B1Q16678 543 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 ZNF672Q499Z4 452 aaPredicted RBP13.15□□□□□ -0.3
VAMP4-202ENST00000367740 CLEC2AQ6UVW9 174 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 PEX26Q7Z412 305 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 CNGA4Q8IV77 575 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 UBQLNLQ8IYU4 475 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 KRT78Q8N1N4 520 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 RFLNBQ8N5W9 214 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 RIT1Q92963 219 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 HGDQ93099 445 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 ADIPOR1Q96A54 375 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 TBCDQ9BTW9 1192 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 PHACTR1Q9C0D0 580 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 C20orf96Q9NUD7 363 aaPredicted RBP13.15□□□□□ -0.3
VAMP4-202ENST00000367740 ZNF490Q9ULM2 529 aaPredicted RBP13.15□□□□□ -0.3
VAMP4-202ENST00000367740 KCNS2Q9ULS6 477 aa13.15□□□□□ -0.3
VAMP4-202ENST00000367740 CADP27708 2225 aa13.15□□□□□ -0.31
VAMP4-202ENST00000367740 MIF4GDA9UHW6 222 aaKnown RBP13.14□□□□□ -0.31
VAMP4-202ENST00000367740 PRAMEF4O60810 478 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 PPM1BO75688 479 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 WDR47O94967 919 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 TCEA1P23193 301 aaKnown RBP13.14□□□□□ -0.31
VAMP4-202ENST00000367740 GDF5P43026 501 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 SPA17Q15506 151 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 BCL2A1Q16548 175 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 C18orf21Q32NC0 220 aaPredicted RBP13.14□□□□□ -0.31
VAMP4-202ENST00000367740 NCMAPQ5T1S8 102 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 PRAMEF9Q5VWM5 478 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 HLA-DQA1Q5Y7H0 255 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 DNAJC14Q6Y2X3 702 aaPredicted RBP13.14□□□□□ -0.31
VAMP4-202ENST00000367740 CHMP1BQ7LBR1 199 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 KBTBD8Q8NFY9 601 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 FNDC9Q8TBE3 224 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 CALML6Q8TD86 181 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 RHBDF1Q96CC6 855 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 VPS39Q96JC1 886 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 LCORQ96JN0 433 aaPredicted RBP13.14□□□□□ -0.31
VAMP4-202ENST00000367740 PELOQ9BRX2 385 aaKnown RBP13.14□□□□□ -0.31
VAMP4-202ENST00000367740 PITHD1Q9GZP4 211 aaPredicted RBP13.14□□□□□ -0.31
VAMP4-202ENST00000367740 C12orf65Q9H3J6 166 aaKnown RBP13.14□□□□□ -0.31
VAMP4-202ENST00000367740 MANSC1Q9H8J5 431 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 KLRF1Q9NZS2 232 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 FBXL2Q9UKC9 423 aa13.14□□□□□ -0.31
VAMP4-202ENST00000367740 H0YC42 278 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 SLC25A16P16260 332 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 KRT15P19012 456 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 HNF1AP20823 631 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 CNTFP26441 200 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 GABRB3P28472 473 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 TERF1P54274 439 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 TPD52P55327 224 aaPredicted RBP13.13□□□□□ -0.31
VAMP4-202ENST00000367740 B3GALT5-AS1P59052 145 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 TNFRSF17Q02223 184 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 SNTA1Q13424 505 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 HSP90AA5PQ58FG0 334 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms