RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ZNF823P16415 610 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ITGB7P26010 798 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 IL12BP29460 328 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ZNF234Q14588 700 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 NNATQ16517 81 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 FLYWCH1Q4VC44 716 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 PDZD3Q86UT5 571 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 PHOSPHO1Q8TCT1 267 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ADAD1Q96M93 576 aaKnown RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 OR8D2Q9GZM6 311 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ZBTB20Q9HC78 741 aaPredicted RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 FZD3Q9NPG1 666 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 NFKBIL1Q9UBC1 381 aaPredicted RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 SMCHD1A6NHR9 2005 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 RREB1Q92766 1687 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 RNGTTO60942 597 aaKnown RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 CXCR1P25024 350 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ISL1P61371 349 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 LEXMQ3ZCV2 418 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 FIGNL1Q6PIW4 674 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 KLHL24Q6TFL4 600 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 RBM12BQ8IXT5 1001 aaKnown RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 ASCC1Q8N9N2 400 aaKnown RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 OR5D16Q8NGK9 328 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 DGAT2Q96PD7 388 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ERMAPQ96PL5 475 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 KXD1Q9BQD3 176 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 AMBRA1Q9C0C7 1298 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 RC3H2Q9HBD1 1191 aaKnown RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 C14orf105Q9NVL8 296 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 UCKL1Q9NWZ5 548 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 CLDND1Q9NY35 253 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 DKK3Q9UBP4 350 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 EIF3KQ9UBQ5 218 aaKnown RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 PTPRZ1P23471 2315 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 PCDHGA12O60330 932 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 VSX2P58304 361 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 SYPL1Q16563 259 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 AMZ1Q400G9 498 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 CCSMST1Q4G0I0 132 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 CEACAM19Q7Z692 300 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ATCAYQ86WG3 371 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ANKK1Q8NFD2 765 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 FANK1Q8TC84 345 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 HSPA12BQ96MM6 686 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 GPER1Q99527 375 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 FAM83CQ9BQN1 747 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 IKZF5Q9H5V7 419 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ZNF385DQ9H6B1 395 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 CCL26Q9Y258 94 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 B3GNT3Q9Y2A9 372 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 A0A1W2PQL4 384 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 FAM219BQ5XKK7 198 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 Q6ZNX1 250 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 CPOQ8IVL8 374 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 METTL4Q8N3J2 472 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 LINC01599Q8WXQ3 324 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 PNO1Q9NRX1 252 aaKnown RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 NLKQ9UBE8 527 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 COPS7AQ9UBW8 275 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 GNG8Q9UK08 70 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 GRIP1Q9Y3R0 1128 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 FAM186AA6NE01 2351 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 A0A1W2PPK0 400 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 GRXCR1A8MXD5 290 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 WWP2O00308 870 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ITGBL1O95965 494 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 ACVR1BP36896 505 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 NAA10P41227 235 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 C1orf61Q13536 156 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 DECR1Q16698 335 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 IRAK1BP1Q5VVH5 260 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 KRT77Q7Z794 578 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 SLC44A3Q8N4M1 653 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 MRPL43Q8N983 215 aaKnown RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 DTX3Q8N9I9 347 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 UBE2FQ969M7 185 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 PPP1R14AQ96A00 147 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 HRASLS5Q96KN8 279 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 DPYSL5Q9BPU6 564 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 CCDC32Q9BV29 185 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 LGR4Q9BXB1 951 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ACTL8Q9H568 366 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 CUEDC1Q9NWM3 386 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 PAQR5Q9NXK6 330 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 STOML2Q9UJZ1 356 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 GPR34Q9UPC5 381 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 OR6C74A6NCV1 312 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 UNC119BA6NIH7 251 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 CLDN24A6NM45 220 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 FAM155AB1AL88 458 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 KLK8O60259 260 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 CDC123O75794 336 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 UPK1BO75841 260 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 SEC14L2O76054 403 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 TNFP01375 233 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 SOX3P41225 446 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 GJA8P48165 433 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 SOX2P48431 317 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 WNT4P56705 351 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms