RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 EPOPA6NHQ4 379 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 LATO43561 262 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PTHP01270 115 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 HMGN2P05204 90 aaKnown RBP10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SCG5P05408 212 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 HOXB2P14652 356 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 IFNGR2P38484 337 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 XKP51811 444 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PPP5CP53041 499 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TNFRSF17Q02223 184 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PRKCDQ05655 676 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ZNF404Q494X3 552 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ASPGQ86U10 573 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PLD3Q8IV08 490 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PROKR2Q8NFJ6 384 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 KLHL6Q8WZ60 621 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ACTRT3Q9BYD9 372 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SLC38A1Q9H2H9 487 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 C8orf33Q9H7E9 229 aaPredicted RBP10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TRIM45Q9H8W5 580 aaPredicted RBP10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 LYRM4Q9HD34 91 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PTGFRNQ9P2B2 879 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TBC1D29Q9UFV1 150 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PLEKHM1Q9Y4G2 1056 aa10.09□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TBC1D3KA0A087X1G2 549 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TBC1D3FA6NER0 549 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 CCRL2O00421 344 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 PGRMC2O15173 223 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 PPM1DO15297 605 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 ZW10O43264 779 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 OR10H3O60404 316 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 SOX30O94993 753 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 COL9A1P20849 921 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 HNRNPA2B1P22626 353 aaKnown RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 PBX2P40425 430 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TMED1Q13445 227 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 ARMCX4Q5H9R4 360 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TBC1D3GQ6DHY5 549 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 CDC73Q6P1J9 531 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 CLDN22Q8N7P3 220 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 XAGE5Q8WWM1 108 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 ITPKCQ96DU7 683 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 DSN1Q9H410 356 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 KCMF1Q9P0J7 381 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 ZNF624Q9P2J8 865 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 MSRAQ9UJ68 235 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 PILRAQ9UKJ1 303 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 ZNF780BQ9Y6R6 833 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TBC1D3DA0A087WVF3 549 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TBC1D3IA0A087WXS9 549 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TBC1D3EA0A087X179 549 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TBC1D3LB9A6J9 549 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 LINC01565O15544 149 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 SNRNP200O75643 2136 aaKnown RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 SNX4O95219 450 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 IGLV3-19P01714 112 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 ASGR2P07307 311 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TBC1D3HP0C7X1 549 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 OCM2P0CE71 109 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 OCMP0CE72 109 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 NR2F6P10588 404 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 BMP4P12644 408 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 ZNF10P21506 573 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 FUT4P22083 530 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 BUD31P41223 144 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 GSSP48637 474 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 CLK1P49759 484 aaKnown RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 ZNF45Q02386 682 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 SUZ12Q15022 739 aaKnown RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 GPR19Q15760 415 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TMEM44Q2T9K0 475 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 CYP27C1Q4G0S4 372 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TBC1D3CQ6IPX1 549 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 ZCCHC12Q6PEW1 402 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 PODNL1Q6PEZ8 512 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 USP53Q70EK8 1073 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TBC1D3Q8IZP1 549 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 OR2L13Q8N349 312 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TMCO5AQ8N6Q1 288 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TMEM145Q8NBT3 493 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 LCN9Q8WX39 176 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 OR1E3Q8WZA6 343 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 UCN3Q969E3 161 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 SIPA1Q96FS4 1042 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 MSANTD3Q96H12 275 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 TMEM80Q96HE8 168 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 OR2A5Q96R48 311 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 OR7D2Q96RA2 312 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 FNDC11Q9BVV2 318 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 NKX2-4Q9H2Z4 354 aa10.08□□□□□ -0.8
TRAF3IP2-201ENST00000340026 MN1Q10571 1320 aaPredicted RBP10.07□□□□□ -0.8
TRAF3IP2-201ENST00000340026 A0A075B6Q4 140 aa10.07□□□□□ -0.8
TRAF3IP2-201ENST00000340026 A0A087WV62 115 aa10.07□□□□□ -0.8
TRAF3IP2-201ENST00000340026 SH3BP5O60239 455 aa10.07□□□□□ -0.8
TRAF3IP2-201ENST00000340026 NME6O75414 186 aaPredicted RBP10.07□□□□□ -0.8
TRAF3IP2-201ENST00000340026 THBS1P07996 1170 aa10.07□□□□□ -0.8
TRAF3IP2-201ENST00000340026 SLC35G6P0C7Q6 338 aa10.07□□□□□ -0.8
TRAF3IP2-201ENST00000340026 GAAP10253 952 aa10.07□□□□□ -0.8
TRAF3IP2-201ENST00000340026 GADD45AP24522 165 aa10.07□□□□□ -0.8
TRAF3IP2-201ENST00000340026 CERS1P27544 350 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms