RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SYPP08247 313 aa17.2■□□□□ 0.34
PKP3-201ENST00000331563 HMGA1P17096 107 aaKnown RBP17.2■□□□□ 0.34
PKP3-201ENST00000331563 CXCL3P19876 107 aa17.2■□□□□ 0.34
PKP3-201ENST00000331563 SNRPGP62308 76 aaKnown RBP17.2■□□□□ 0.34
PKP3-201ENST00000331563 ACSM2AQ08AH3 577 aa17.2■□□□□ 0.34
PKP3-201ENST00000331563 ACSM2BQ68CK6 577 aa17.2■□□□□ 0.34
PKP3-201ENST00000331563 ANKRD33Q7Z3H0 272 aa17.2■□□□□ 0.34
PKP3-201ENST00000331563 OR4N4Q8N0Y3 316 aa17.2■□□□□ 0.34
PKP3-201ENST00000331563 OTULINQ96BN8 352 aa17.2■□□□□ 0.34
PKP3-201ENST00000331563 KCNJ15Q99712 375 aa17.2■□□□□ 0.34
PKP3-201ENST00000331563 LYARQ9NX58 379 aaKnown RBP17.2■□□□□ 0.34
PKP3-201ENST00000331563 ADAM30Q9UKF2 790 aa17.2■□□□□ 0.34
PKP3-201ENST00000331563 PPIEQ9UNP9 301 aaKnown RBP17.2■□□□□ 0.34
PKP3-201ENST00000331563 EXO1Q9UQ84 846 aaKnown RBP17.2■□□□□ 0.34
PKP3-201ENST00000331563 PLXNA3P51805 1871 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 TRAV20A0A0B4J274 112 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 SLC22A23A1A5C7 686 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 RAB36O95755 333 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 CFDP00746 253 aaPredicted RBP17.19■□□□□ 0.34
PKP3-201ENST00000331563 HRGP04196 525 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 ITPKAP23677 461 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 XKP51811 444 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 BTG1P62324 171 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 LGALSLQ3ZCW2 172 aaPredicted RBP17.19■□□□□ 0.34
PKP3-201ENST00000331563 MZT2AQ6P582 158 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 METAP1DQ6UB28 335 aaPredicted RBP17.19■□□□□ 0.34
PKP3-201ENST00000331563 GPR155Q7Z3F1 870 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 NPAS3Q8IXF0 933 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 IQCF1Q8N6M8 205 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 FOXJ1Q92949 421 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 PAWRQ96IZ0 340 aaKnown RBP17.19■□□□□ 0.34
PKP3-201ENST00000331563 RADILQ96JH8 1075 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 TMEM175Q9BSA9 504 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 MED18Q9BUE0 208 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 TBC1D17Q9HA65 648 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 PDFQ9HBH1 243 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 A8MVJ9 347 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 LINC00587B1AMM8 73 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 SGK494L7N484 410 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 CBX4O00257 560 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 IGLV3-27P01718 113 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 ZDHHC11BP0C7U3 371 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 OSMP13725 252 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 DNASE1P24855 282 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 XCR1P46094 333 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 BDKRB1P46663 353 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 FABP5Q01469 135 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 LRRC74AQ0VAA2 488 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 GCNT6Q5T4J0 391 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 TMEM107Q6UX40 140 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 TMPRSS9Q7Z410 1059 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 ADGRF3Q8IZF5 1079 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 TMEM169Q96HH4 297 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 SLC6A18Q96N87 628 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 CHST8Q9H2A9 424 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 FZD3Q9NPG1 666 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 KCMF1Q9P0J7 381 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 EXTL2Q9UBQ6 330 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 SPATA2Q9UM82 520 aa17.19■□□□□ 0.34
PKP3-201ENST00000331563 TRBC2A0A5B9 178 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 GABRR3A8MPY1 467 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 KRBOX1C9JBD0 128 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 F5H5T6 163 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 SMSP52788 366 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 PRMT2P55345 433 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 MPP7Q5T2T1 576 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 ZNF852Q6ZMS4 543 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 RRM2BQ7LG56 351 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 OR52I1Q8NGK6 324 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 OR8J1Q8NGP2 316 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 UBTD2Q8WUN7 234 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 NXPE2Q96DL1 559 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 TMED9Q9BVK6 235 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 REG4Q9BYZ8 158 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 THSD1Q9NS62 852 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 MAP4K5Q9Y4K4 846 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 TRBV4-1A0A0J9YWV2 114 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 PRRG1O14668 218 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 IFNW1P05000 195 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 BPIP17213 487 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 SLC6A1P30531 599 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 CORO1AP31146 461 aaKnown RBP17.18■□□□□ 0.34
PKP3-201ENST00000331563 MAPKAPK2P49137 400 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 WNT4P56705 351 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 LINGO4Q6UY18 593 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 CERS6Q6ZMG9 384 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 CCDC36Q8IYA8 594 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
PKP3-201ENST00000331563 C1orf52Q8N6N3 182 aaKnown RBP17.18■□□□□ 0.34
PKP3-201ENST00000331563 ZNF461Q8TAF7 563 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 HHIPQ96QV1 700 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 ATF6BQ99941 703 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 P2RY13Q9BPV8 354 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 OR51J1Q9H342 316 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 COA4Q9NYJ1 87 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 SLC22A14Q9Y267 594 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 PCDHB9Q9Y5E1 797 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 ENPP4Q9Y6X5 453 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 NINQ8N4C6 2090 aa17.18■□□□□ 0.34
PKP3-201ENST00000331563 MFSD2BA6NFX1 497 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms