RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SRRDQ9UH36 339 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 YIPF1Q9Y548 306 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 LOC105369274A0A096LPK9 316 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 F10P00742 488 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 DPP6P42658 865 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 PDZD11Q5EBL8 140 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 OR4N4Q8N0Y3 316 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 LIPHQ8WWY8 451 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 APIPQ96GX9 242 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 OR4K3Q96R72 315 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 NUDT22Q9BRQ3 303 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 FRMPD1Q5SYB0 1578 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 TRAV18A0A075B6X5 111 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 TEX13CA0A0J9YWL9 993 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 IGLON5A6NGN9 336 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 DUXAA6NLW8 204 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 RFPL2O75678 378 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 TFP02787 698 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 ANXA3P12429 323 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 HOXB2P14652 356 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 CNR2P34972 360 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 TBPL1P62380 186 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 TUBA4AP68366 448 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 SIM1P81133 766 aaPredicted RBP12.06□□□□□ -0.48
USP38-201ENST00000307017 PPIGQ13427 754 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP38-201ENST00000307017 GPM6BQ13491 265 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 HAS2Q92819 552 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 PDCD1LG2Q9BQ51 273 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 PARP12Q9H0J9 701 aaKnown RBP12.06□□□□□ -0.48
USP38-201ENST00000307017 REEP4Q9H6H4 257 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 SLC7A7Q9UM01 511 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 MGST1P10620 155 aaKnown RBP12.05□□□□□ -0.48
USP38-201ENST00000307017 ADRB3P13945 408 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ILKQ13418 452 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 EIF2B1Q14232 305 aaKnown RBP12.05□□□□□ -0.48
USP38-201ENST00000307017 CATSPEREQ5SY80 951 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 LRRC18Q8N456 261 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 SLC35B2Q8TB61 432 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 POLMQ9NP87 494 aaPredicted RBP12.05□□□□□ -0.48
USP38-201ENST00000307017 CDC14CA4D256 554 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 SLC1A7O00341 560 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 PMM2O15305 246 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 SLC19A2O60779 497 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 CRYZL1O95825 349 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ARHGAP12Q8IWW6 846 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 NRG4Q8WWG1 115 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 MAPKAP1Q9BPZ7 522 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 SSU72Q9NP77 194 aaKnown RBP12.05□□□□□ -0.48
USP38-201ENST00000307017 COPZ2Q9P299 210 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 F5H5K5 113 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 HMGB3O15347 200 aaKnown RBP12.05□□□□□ -0.48
USP38-201ENST00000307017 IFNA5P01569 189 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 HNF1AP20823 631 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 S1PR1P21453 382 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 REEP3Q6NUK4 255 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 IL1F10Q8WWZ1 152 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 MGLLQ99685 303 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 SMOQ99835 787 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 GPR174Q9BXC1 333 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 PRTFDC1Q9NRG1 225 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 DNAJB11Q9UBS4 358 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 B4GALT6Q9UBX8 382 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 CDH10Q9Y6N8 788 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 FAM230AA0A1W2PPH8 454 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 CENPBD1B2RD01 187 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 LEFTY2O00292 366 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ALDOAP04075 364 aaKnown RBP12.05□□□□□ -0.48
USP38-201ENST00000307017 HRGP04196 525 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 GABRA5P31644 462 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 OTX2P32243 289 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 MGAT3Q09327 533 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 SNTB2Q13425 540 aaKnown RBP12.05□□□□□ -0.48
USP38-201ENST00000307017 UNC50Q53HI1 259 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 APCDD1Q8J025 514 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 RCBTB1Q8NDN9 531 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ZFP90Q8TF47 636 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ELMOD3Q96FG2 381 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 GPR22Q99680 433 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 MED20Q9H944 212 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 STUB1Q9UNE7 303 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ARHGAP23Q9P227 1491 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ASGR2P07307 311 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 JAG1P78504 1218 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 EEF1A1P5Q5VTE0 462 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ZNF765Q7L2R6 523 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 OR52P1PQ8NH57 321 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 GALNT9Q9HCQ5 603 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 TEX10Q9NXF1 929 aaPredicted RBP12.05□□□□□ -0.48
USP38-201ENST00000307017 PCDHB11Q9Y5F2 797 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 GON4LQ3T8J9 2241 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 GRID2O43424 1007 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 HOXD13P35453 343 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 AKR1C2P52895 323 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ATP6AP1Q15904 470 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 C6orf136Q5SQH8 315 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 ZSCAN4Q8NAM6 433 aaPredicted RBP12.05□□□□□ -0.48
USP38-201ENST00000307017 AVL9Q8NBF6 648 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 CAMKVQ8NCB2 501 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 OR2T33Q8NG76 320 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 C9orf43Q8TAL5 461 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms