RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 AHCYL2Q96HN2 611 aaKnown RBP20.88■□□□□ 0.93
SMAD1-201ENST00000302085 MS4A4EQ96PG1 132 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 WFDC6Q9BQY6 131 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 C19orf53Q9UNZ5 99 aaPredicted RBP20.88■□□□□ 0.93
SMAD1-201ENST00000302085 FAM32AQ9Y421 112 aaKnown RBP20.88■□□□□ 0.93
SMAD1-201ENST00000302085 CCDC88CQ9P219 2028 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 A0A0G2JPF8 293 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 LOC100130705A0A1B0GUX0 176 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 HNRNPCL2B2RXH8 293 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 HNRNPCL3B7ZW38 293 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 SLC16A6O15403 523 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 JRKO75564 520 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 ZBTB11O95625 1053 aaPredicted RBP20.88■□□□□ 0.93
SMAD1-201ENST00000302085 HNRNPCL4P0DMR1 293 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 ETS2P15036 469 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 GNSP15586 552 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 GLB1P16278 677 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 RHCEP18577 417 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 PRAMEF8Q5VWM4 474 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 PRAMEF7Q5VXH5 474 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 Q8N9G6 341 aaPredicted RBP20.88■□□□□ 0.93
SMAD1-201ENST00000302085 OR4D11Q8NGI4 311 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 GIPC3Q8TF64 312 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 ZNF354BQ96LW1 612 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 GIN1Q9NXP7 522 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 HCN3Q9P1Z3 774 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 PILRBQ9UKJ0 227 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 SPTBP11277 2137 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 FFAR1O14842 300 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 ITGAMP11215 1152 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 LIMS1P48059 325 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 ARRB1P49407 418 aaPredicted RBP20.87■□□□□ 0.93
SMAD1-201ENST00000302085 HMGA2P52926 109 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 CSTF1Q05048 431 aaKnown RBP20.87■□□□□ 0.93
SMAD1-201ENST00000302085 MGAT2Q10469 447 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 FAM53BQ14153 422 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 EXOC3L2Q2M3D2 409 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 AMZ1Q400G9 498 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 KCTD21Q4G0X4 260 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 THAP5Q7Z6K1 395 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 HMGN2P46Q86SG4 172 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 ATG16L2Q8NAA4 619 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 SLC16A11Q8NCK7 471 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 ADAMTS15Q8TE58 950 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 RASSF5Q8WWW0 418 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 GAB3Q8WWW8 586 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 LIPT1Q9Y234 373 aa20.87■□□□□ 0.93
SMAD1-201ENST00000302085 TRIM64A6NGJ6 449 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 LAMTOR5O43504 91 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 NT5EP21589 574 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 RPL5P46777 297 aaKnown RBP20.86■□□□□ 0.93
SMAD1-201ENST00000302085 CDH15P55291 814 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 IL1RL1Q01638 556 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 KCNAB1Q14722 419 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 CDC73Q6P1J9 531 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 RBM45Q8IUH3 476 aaKnown RBP20.86■□□□□ 0.93
SMAD1-201ENST00000302085 C8orf59Q8N0T1 100 aaPredicted RBP20.86■□□□□ 0.93
SMAD1-201ENST00000302085 TRNT1Q96Q11 434 aaKnown RBP20.86■□□□□ 0.93
SMAD1-201ENST00000302085 TMEM9Q9P0T7 183 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 RHCGQ9UBD6 479 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 SEMA7AO75326 666 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 EPPINO95925 133 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 GPR3P46089 330 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 MAT1AQ00266 395 aaKnown RBP20.86■□□□□ 0.93
SMAD1-201ENST00000302085 CHRNEQ04844 493 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 GANABQ14697 944 aaKnown RBP20.86■□□□□ 0.93
SMAD1-201ENST00000302085 PRICKLE4Q2TBC4 344 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 FAM214AQ32MH5 1076 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 PLK5Q496M5 336 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 LIN52Q52LA3 116 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 GARNL3Q5VVW2 1013 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 HEPHL1Q6MZM0 1159 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 LACC1Q8IV20 430 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 SLC5A8Q8N695 610 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 FEVQ99581 238 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 BTBD2Q9BX70 525 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 SLC38A1Q9H2H9 487 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 RIBC2Q9H4K1 309 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 KRT84Q9NSB2 600 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 IRAK4Q9NWZ3 460 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 KIF17Q9P2E2 1029 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 PCDHGA8Q9Y5G5 932 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 CABIN1Q9Y6J0 2220 aa20.86■□□□□ 0.93
SMAD1-201ENST00000302085 FITM1A5D6W6 292 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 PCDH17O14917 1159 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 CASC3O15234 703 aaKnown RBP20.85■□□□□ 0.93
SMAD1-201ENST00000302085 HRO43593 1189 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 NSA2O95478 260 aaKnown RBP20.85■□□□□ 0.93
SMAD1-201ENST00000302085 RNH1P13489 461 aaKnown RBP20.85■□□□□ 0.93
SMAD1-201ENST00000302085 ELK4P28324 431 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 CD1CP29017 333 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 NR1D2Q14995 579 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 MICAQ29983 383 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 INAVAQ3KP66 663 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 TCTE1Q5JU00 501 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 TCTN3Q6NUS6 607 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 KANSL1Q7Z3B3 1105 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 ZG16BQ96DA0 208 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 PEX11GQ96HA9 241 aa20.85■□□□□ 0.93
SMAD1-201ENST00000302085 NECAB3Q96P71 396 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms