RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 FUT5Q11128 374 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 PMS2CLQ68D20 193 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 HMGN2P46Q86SG4 172 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 ZNF605Q86T29 641 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 COMTD1Q86VU5 262 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 GATAD2AQ86YP4 633 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 CCDC71Q8IV32 467 aaPredicted RBP20.05■□□□□ 0.8
SOX17-201ENST00000297316 ALDH16A1Q8IZ83 802 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 SLC5A8Q8N695 610 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 FBLIM1Q8WUP2 373 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 C16orf58Q96GQ5 468 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 RHCGQ9UBD6 479 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 SEMA7AO75326 666 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 HTR1AP08908 422 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 MC3RP41968 323 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 IL5RAQ01344 420 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 LASP1Q14847 261 aaKnown RBP20.05■□□□□ 0.8
SOX17-201ENST00000297316 RBM48Q5RL73 367 aaKnown RBP20.05■□□□□ 0.8
SOX17-201ENST00000297316 C6orf132Q5T0Z8 1188 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 Q6ZPB1 254 aaPredicted RBP20.05■□□□□ 0.8
SOX17-201ENST00000297316 DNAJC22Q8N4W6 341 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 ZNF655Q8N720 491 aaPredicted RBP20.05■□□□□ 0.8
SOX17-201ENST00000297316 OR9A4Q8NGU2 314 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 COL26A1Q96A83 441 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 ZNF347Q96SE7 839 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 FEVQ99581 238 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 TREX2Q9BQ50 279 aaPredicted RBP20.05■□□□□ 0.8
SOX17-201ENST00000297316 ROGDIQ9GZN7 287 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 POLR1BQ9H9Y6 1135 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 SLC22A7Q9Y694 548 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 ENPP4Q9Y6X5 453 aa20.05■□□□□ 0.8
SOX17-201ENST00000297316 CCDC163A0A0D9SF12 145 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 LAMTOR5O43504 91 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 GALR3O60755 368 aaPredicted RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 TRMUO75648 421 aaKnown RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 DNAJB5O75953 348 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 HMGN2P05204 90 aaKnown RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 EEF1B2P24534 225 aaKnown RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 RYKP34925 604 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 SHC2P98077 582 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 CEBPEQ15744 281 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 ZNF773Q6PK81 442 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 TMEM64Q6YI46 380 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 ARHGEF39Q8N4T4 335 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 SIMC1Q8NDZ2 872 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 OR4D11Q8NGI4 311 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 GIPC3Q8TF64 312 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 ELF4Q99607 663 aaPredicted RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 ACER3Q9NUN7 267 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 PAK1IP1Q9NWT1 392 aaPredicted RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 PHF11Q9UIL8 331 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 KCNE3Q9Y6H6 103 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 ZNF780BQ9Y6R6 833 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 PCDH17O14917 1159 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 LDB3O75112 727 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 UGT2B11O75310 529 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 RDH16O75452 317 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 CDK5R2Q13319 367 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 AMZ1Q400G9 498 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 WDR5BQ86VZ2 330 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 RBM45Q8IUH3 476 aaKnown RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 Q8N9G6 341 aaPredicted RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 OR10G2Q8NGC3 310 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 OR9Q2Q8NGE9 314 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 COL21A1Q96P44 957 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 PIP5K1AQ99755 562 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 P2RX2Q9UBL9 471 aa20.04■□□□□ 0.8
SOX17-201ENST00000297316 RSL24D1Q9UHA3 163 aaKnown RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 NDRG4Q9ULP0 352 aaKnown RBP20.04■□□□□ 0.8
SOX17-201ENST00000297316 E9PQ18 207 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 FFAR1O14842 300 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 HRO43593 1189 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 ATXN8OSP0DMR3 200 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 MPIP34949 423 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 LIMS1P48059 325 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 RXRGP48443 463 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 XKP51811 444 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 IL18R1Q13478 541 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 NEDD8Q15843 81 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 SDR16C5Q8N3Y7 309 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 UBE2FQ969M7 185 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 NIPSNAP1Q9BPW8 284 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 SEMA3GQ9NS98 782 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 ZSCAN32Q9NX65 697 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 TMEM9Q9P0T7 183 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 GMPPBQ9Y5P6 360 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 SLC1A7O00341 560 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 CHRM4P08173 479 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 ITGA2P17301 1181 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 CFHR1Q03591 330 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 NPRL3Q12980 569 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 KEAP1Q14145 624 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 KCNAB1Q14722 419 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 WDR53Q7Z5U6 358 aaPredicted RBP20.03■□□□□ 0.8
SOX17-201ENST00000297316 GPR141Q7Z602 305 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 LACC1Q8IV20 430 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 LGI4Q8N135 537 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 EDAQ92838 391 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 ERVMER34-1Q9H9K5 563 aa20.03■□□□□ 0.8
SOX17-201ENST00000297316 EQTNQ9NQ60 294 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms