RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 A6NL46 340 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 CDKL1Q00532 357 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 GTF2IRD2BQ6EKJ0 949 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 ADAMTSL4Q6UY14 1074 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 MAMDC2Q7Z304 686 aaPredicted RBP16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 GTF2IRD2Q86UP8 949 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 INSM2Q96T92 566 aaPredicted RBP16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 KDM4BO94953 1096 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 RPS17P08708 135 aaKnown RBP16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 PABPC4LP0CB38 370 aaKnown RBP16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 DDCP20711 480 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 S1PR1P21453 382 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 EFR3AQ14156 821 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZNF627Q7L945 461 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 LINGO2Q7L985 606 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 SLC15A3Q8IY34 581 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 TNFAIP8L1Q8WVP5 186 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 NTMT1Q9BV86 223 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 CCDC106Q9BWC9 280 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 GAREM1Q9H706 876 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 COMMD3Q9UBI1 195 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 HS3ST3A1Q9Y663 406 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 G3V2L1 256 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 MMP12P39900 470 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 PIK3R3Q92569 461 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 TUBA8Q9NY65 449 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 PAPPA2Q9BXP8 1791 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 HTR3EA5X5Y0 456 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 AREL1O15033 823 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 PROM1O43490 865 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 ENTPD6O75354 484 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 ETFAP13804 333 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 MBTPS1Q14703 1052 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMEM31Q5JXX7 168 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 CNTN4Q8IWV2 1026 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 NLGN4XQ8N0W4 816 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 DDIT4LQ96D03 193 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 PDLIM5Q96HC4 596 aaKnown RBP16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMEM80Q96HE8 168 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 MNTQ99583 582 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMEM168Q9H0V1 697 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 EXOSC1Q9Y3B2 195 aaKnown RBP16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 NAALAD2Q9Y3Q0 740 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 IGLV3-10A0A075B6K4 115 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 ADRA1AP35348 466 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 TRA2BP62995 288 aaKnown RBP16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 UBALD2Q8IYN6 164 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 ARL14Q8N4G2 192 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 OR5K2Q8NHB8 316 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMEM45AQ9NWC5 275 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 ANTXRLA6NF34 631 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 PVRP15151 417 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 SGSHP51688 502 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 DCAF12Q5T6F0 453 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 OR2L8Q8NGY9 312 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 SMIM14Q96QK8 99 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 MMP17Q9ULZ9 603 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 GXYLT2A0PJZ3 443 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 RNF144AP50876 292 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 DCDC1P59894 354 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMEM52BQ4KMG9 183 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 C9orf50Q5SZB4 431 aa16.81■□□□□ 0.28
CDC42EP3-201ENST00000295324 FABP12A6NFH5 140 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 H2BFMP0C1H6 154 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 AHRP35869 848 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 WSCD2Q2TBF2 565 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 ALG10BQ5I7T1 473 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 SYNPOQ8N3V7 929 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 SFXN2Q96NB2 322 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 DPH2Q9BQC3 489 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 DNAJC27Q9NZQ0 273 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 ACAD8Q9UKU7 415 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 TAF1P21675 1872 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 OXSR1O95747 527 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 SRFP11831 508 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 F8A1P23610 371 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 AZGP1P25311 298 aaKnown RBP16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 MRPL58Q14197 206 aaKnown RBP16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 IRF2BPLQ9H1B7 796 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 C5AR2Q9P296 337 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 PFDN2Q9UHV9 154 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 RAB2AP61019 212 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 CBX3Q13185 183 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 COL9A2Q14055 689 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 LAPTM4AQ15012 233 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 CARD17Q5XLA6 110 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 SLC45A3Q96JT2 553 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 GSTO2Q9H4Y5 243 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 STARD5Q9NSY2 213 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 SARDHQ9UL12 918 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 GCGRP47871 477 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 TREML1Q86YW5 311 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 MROQ9BYG7 248 aa16.8■□□□□ 0.28
CDC42EP3-201ENST00000295324 TTLL8A6PVC2 850 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 SLC6A8P48029 635 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 UBE2NP61088 152 aaKnown RBP16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 SRYQ05066 204 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 PLPP6Q8IY26 295 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 NSG1A0A0A6YYJ2 146 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 EFCAB7A8K855 629 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms