RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 DCDC1P59894 354 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 GXYLT1Q4G148 440 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 NADSYN1Q6IA69 706 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 ACOT4Q8N9L9 421 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 FKBP10Q96AY3 582 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 PITHD1Q9GZP4 211 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-201ENST00000287008 POT1Q9NUX5 634 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 PTBP2Q9UKA9 531 aaKnown RBP17.61■□□□□ 0.41
PCDH1-201ENST00000287008 CCL26Q9Y258 94 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 PCDHGB6Q9Y5F9 930 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 MYO10Q9HD67 2058 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 C17orf105B2RV13 164 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 SLC2A2P11168 524 aaPredicted RBP17.6■□□□□ 0.41
PCDH1-201ENST00000287008 NAA10P41227 235 aaPredicted RBP17.6■□□□□ 0.41
PCDH1-201ENST00000287008 MAGEA6P43360 314 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 PRLHRP49683 370 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 UBE2NP61088 152 aaKnown RBP17.6■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF765Q7L2R6 523 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 DGLUCYQ7Z3D6 616 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 AGBL5Q8NDL9 886 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 SFXN2Q96NB2 322 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 MAP3K3Q99759 626 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 SLC7A11Q9UPY5 501 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 WASF3Q9UPY6 502 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 C5orf51A6NDU8 294 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 CDRT1O95170 752 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 PRLP01236 227 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 APOC1P02654 83 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 MOGSQ13724 837 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 HSF5Q4G112 596 aaPredicted RBP17.6■□□□□ 0.41
PCDH1-201ENST00000287008 C4orf46Q504U0 113 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 GPR149Q86SP6 731 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF565Q8N9K5 539 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 CLEC1AQ8NC01 280 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 BORCS8Q96FH0 119 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 FBXL20Q96IG2 436 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 SECISBP2Q96T21 854 aaKnown RBP17.6■□□□□ 0.41
PCDH1-201ENST00000287008 DMRT3Q9NQL9 472 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 PISDQ9UG56 409 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF221Q9UK13 617 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 CACNG3O60359 315 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 SCGNO76038 276 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 FGF4P08620 206 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 MYOGP15173 224 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 ARPC4P59998 168 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 GLT8D1Q68CQ7 371 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 LRFN4Q6PJG9 635 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 HACD2Q6Y1H2 254 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 TAAR2Q9P1P5 351 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
PCDH1-201ENST00000287008 GJE1A6NN92 205 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 IFNA21P01568 189 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 SPIN3Q5JUX0 258 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 ARHGAP11AQ6P4F7 1023 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 ULK3Q6PHR2 472 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 TOMM5Q8N4H5 51 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 OR8K3Q8NH51 312 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 TREX1Q9NSU2 369 aa17.6■□□□□ 0.41
PCDH1-201ENST00000287008 ABLIM3O94929 683 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 ENTPD1P49961 510 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 ST3GAL4Q11206 333 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 SEC23BQ15437 767 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF480Q8WV37 535 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 PRSS16Q9NQE7 514 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 ACAD8Q9UKU7 415 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 TRAPPC13A5PLN9 417 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 SLC22A31A6NKX4 558 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 TTLL8A6PVC2 850 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 HTRA2O43464 458 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-201ENST00000287008 OXSR1O95747 527 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-201ENST00000287008 PABPC4LP0CB38 370 aaKnown RBP17.59■□□□□ 0.41
PCDH1-201ENST00000287008 PVRP15151 417 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 GNG2P59768 71 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 TUBA3CQ13748 450 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 CEP76Q8TAP6 659 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 ACOT12Q8WYK0 555 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 PGAM5Q96HS1 289 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 TUBA8Q9NY65 449 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-201ENST00000287008 AQP9O43315 295 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 KLKB1P03952 638 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 CARTPTQ16568 116 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 SCGB2B2Q4G0G5 96 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 ALG10Q5BKT4 473 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 ARSJQ5FYB0 599 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-201ENST00000287008 FAM180BQ6P0A1 224 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 OBP2AQ9NY56 170 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 CA5BQ9Y2D0 317 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 ALS2Q96Q42 1657 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 SGK494L7N484 410 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 PEPDP12955 493 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF43P17038 809 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 PDHA2P29803 388 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 CTHP32929 405 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 IRS1P35568 1242 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 SF3B4Q15427 424 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCDH1-201ENST00000287008 UBE2Q1Q7Z7E8 422 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 EID2Q8N6I1 236 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 TM9SF4Q92544 642 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 NINJ1Q92982 152 aa17.59■□□□□ 0.41
PCDH1-201ENST00000287008 SETD1AO15047 1707 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms