RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 CNTN1Q12860 1018 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 FOXD4Q12950 439 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 TARDBPQ13148 414 aaKnown RBP eCLIP11.74□□□□□ -0.53
BEST3-201ENST00000266661 LARS2Q15031 903 aaKnown RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 GLYR1Q49A26 553 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 SYT14P1Q58G82 188 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 CASP12Q6UXS9 341 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 NUDT13Q86X67 352 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 LINC01555Q8NAE3 123 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 TP53INP1Q96A56 240 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 EXOSC8Q96B26 276 aaKnown RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 RGMAQ96B86 450 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 ZNF707Q96C28 371 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 SRRQ9GZT4 340 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 PCBD2Q9H0N5 130 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 MIXL1Q9H2W2 232 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 TM7SF3Q9NS93 570 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 CLEC1BQ9P126 229 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 P2RX2Q9UBL9 471 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 SF3B6Q9Y3B4 125 aaKnown RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 DNMT3AQ9Y6K1 912 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 IGKV1-8A0A0C4DH67 115 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 H7BY64 318 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 M0R3H8 397 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 PPM1DO15297 605 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 SLC28A2O43868 658 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 MSL3P1P0C860 447 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 DRD2P14416 443 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 PSMA1P25786 263 aaKnown RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 ADAM15Q13444 863 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 ELAVL3Q14576 367 aaKnown RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 ZIC1Q15915 447 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 NDUFA9Q16795 377 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 GRASPQ7Z6J2 395 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 TRIM69Q86WT6 500 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 SFTPA1Q8IWL2 248 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 LINC00471Q8N535 108 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 IQCF1Q8N6M8 205 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 OR4K5Q8NGD3 323 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 OR6F1Q8NGZ6 308 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 MAFAQ8NHW3 353 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 GPR151Q8TDV0 419 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 ING5Q8WYH8 240 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 ZNF486Q96H40 463 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 ZNF582Q96NG8 517 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 PRAP1Q96NZ9 151 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 POLR2J2Q9GZM3 115 aaKnown RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 MOV10Q9HCE1 1003 aaKnown RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 FGF20Q9NP95 211 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 SEC14L3Q9UDX4 400 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.74□□□□□ -0.53
BEST3-201ENST00000266661 GRIP1Q9Y3R0 1128 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 CCDC88CQ9P219 2028 aa11.74□□□□□ -0.53
BEST3-201ENST00000266661 MYO10Q9HD67 2058 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 OTOL1A6NHN0 477 aaPredicted RBP11.73□□□□□ -0.53
BEST3-201ENST00000266661 WASHC1A8K0Z3 465 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 H3BN98 237 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 RGS13O14921 159 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 PLD2O14939 933 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 CLEC3AO75596 197 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 IL1AP01583 271 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 CHRM4P08173 479 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 ACADMP11310 421 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 TNNI3P19429 210 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 ETV5P41161 510 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 ETV1P50549 477 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 GINS1Q14691 196 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 SF3B4Q15427 424 aaKnown RBP eCLIP11.73□□□□□ -0.53
BEST3-201ENST00000266661 BAK1Q16611 211 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 SPDYE7PQ495Y7 208 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 ZMAT1Q5H9K5 638 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 C3orf38Q5JPI3 329 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 NXNL2Q5VZ03 156 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 OR4C11Q6IEV9 310 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 MRM1Q6IN84 353 aaKnown RBP11.73□□□□□ -0.53
BEST3-201ENST00000266661 WASH2PQ6VEQ5 465 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 TMEM64Q6YI46 380 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 ZNF793Q6ZN11 406 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 OLIG3Q7RTU3 272 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 NRARPQ7Z6K4 114 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 LRRTM4Q86VH4 590 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 KIF18BQ86Y91 864 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 ZNF485Q8NCK3 441 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 OR5D16Q8NGK9 328 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 OR6T1Q8NGN1 323 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 SLC25A46Q96AG3 418 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 TMCO6Q96DC7 493 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 SLC35G5Q96KT7 338 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 NEDD4LQ96PU5 975 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 DPH7Q9BTV6 452 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 LGR4Q9BXB1 951 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 HDAC8Q9BY41 377 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 ISYNA1Q9NPH2 558 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 TXNL4BQ9NX01 149 aaKnown RBP11.73□□□□□ -0.53
BEST3-201ENST00000266661 TVP23BQ9NYZ1 205 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 PLEKHB1Q9UF11 243 aaPredicted RBP11.73□□□□□ -0.53
BEST3-201ENST00000266661 FBXW2Q9UKT8 454 aa11.73□□□□□ -0.53
BEST3-201ENST00000266661 LRIT2A6NDA9 550 aa11.72□□□□□ -0.53
BEST3-201ENST00000266661 STK25O00506 426 aa11.72□□□□□ -0.53
BEST3-201ENST00000266661 MAN2B1O00754 1011 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms