RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 GNA15P30679 374 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 NOVA1P51513 510 aaKnown RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 DNAJB13P59910 316 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 DCDP81605 110 aaKnown RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SEMA5AQ13591 1074 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PTPRCAPQ14761 206 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 RSU1Q15404 277 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 LGALSLQ3ZCW2 172 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 ZRANB3Q5FWF4 1079 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PRAMEF5Q5TYX0 476 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PRAMEF9Q5VWM5 478 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PRAMEF6Q5VXH4 476 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 TAPT1Q6NXT6 567 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 CHST3Q7LGC8 479 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PIGZQ86VD9 579 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 NAT16Q8N8M0 369 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 UBAC2Q8NBM4 344 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 DPF1Q92782 380 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SENP5Q96HI0 755 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 APOLD1Q96LR9 279 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 CITED1Q99966 193 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 MXRA8Q9BRK3 442 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 B3GNT5Q9BYG0 378 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 FAM49AQ9H0Q0 323 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 C12orf65Q9H3J6 166 aaKnown RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SLC28A3Q9HAS3 691 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SMURF1Q9HCE7 757 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 GKN1Q9NS71 199 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SLCO1C1Q9NYB5 712 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PDP1Q9P0J1 537 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 NOD1Q9Y239 953 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 DYRK1BQ9Y463 629 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 LAMB4A4D0S4 1761 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 A0A1W2PPE3 182 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SLC35F4A4IF30 521 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 LRIT2A6NDA9 550 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 DISC1C4P0D8 188 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 PDXKO00764 312 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 PPT1P50897 306 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 RAP1BP61224 184 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 PDZK1IP1Q13113 114 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 KLHL22Q53GT1 634 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 DDIASQ8IXT1 998 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 PGAM4Q8N0Y7 254 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SVBPQ8N300 66 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 ACOT12Q8WYK0 555 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SLC39A7Q92504 469 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 YIPF6Q96EC8 236 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SCMH1Q96GD3 660 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 APIPQ96GX9 242 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SLC38A2Q96QD8 506 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 TSNAXQ99598 290 aaKnown RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 C7orf50Q9BRJ6 194 aaKnown RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 ALG8Q9BVK2 526 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 RNF208Q9H0X6 261 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 KRCC1Q9NPI7 259 aaPredicted RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 MARCOQ9UEW3 520 aaPredicted RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 OTOFQ9HC10 1997 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF638Q14966 1978 aaKnown RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 LAMA4Q16363 1823 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 H0Y8G0 127 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SERPINA3P01011 423 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 ASGR2P07307 311 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 TSHRP16473 764 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 S100A2P29034 98 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 GRK5P34947 590 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 RORCP51449 518 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SIM1P81133 766 aaPredicted RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 CDK6Q00534 326 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SCN1BQ07699 218 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 CEACAM7Q14002 265 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 HEPACAMQ14CZ8 416 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 CYBRD1Q53TN4 286 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 MIIPQ5JXC2 388 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 NBPF12Q5TAG4 269 aaPredicted RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 DCAF12L1Q5VU92 463 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 CLEC6AQ6EIG7 209 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 BRICD5Q6PL45 260 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 COLCA1Q6ZS62 124 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 CCDC190Q86UF4 302 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 CUZD1Q86UP6 607 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 CACUL1Q86Y37 369 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 KMT5CQ86Y97 462 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 CRLF3Q8IUI8 442 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 PUSL1Q8N0Z8 303 aaKnown RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 PRELID2Q8N945 189 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 MRPL43Q8N983 215 aaKnown RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 OR11H4Q8NGC9 324 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 THAP6Q8TBB0 222 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 WDR11Q9BZH6 1224 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 TSPAN10Q9H1Z9 355 aaPredicted RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SLC52A2Q9HAB3 445 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 WDR41Q9HAD4 459 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 CACYBPQ9HB71 228 aaKnown RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 ZFYVE1Q9HBF4 777 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 SEPT9Q9UHD8 586 aaPredicted RBP7.35□□□□□ -1.23
GPNMB-201ENST00000258733 FBXL3Q9UKT7 428 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 ASB1Q9Y576 335 aa7.35□□□□□ -1.23
GPNMB-201ENST00000258733 E7EWF7 191 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms