RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CERS6Q6ZMG9 384 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.18□□□□□ -1.26
RIF1-201ENST00000243326 HAPLN3Q96S86 360 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 HCN4Q9Y3Q4 1203 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 MRC1P22897 1456 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 AMY2AP04746 511 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 SLC2A5P22732 501 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 GK2Q14410 553 aaPredicted RBP7.18□□□□□ -1.26
RIF1-201ENST00000243326 MAPKAP1Q9BPZ7 522 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 TREX2Q9BQ50 279 aaPredicted RBP7.18□□□□□ -1.26
RIF1-201ENST00000243326 CDCP1Q9H5V8 836 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 NLE1Q9NVX2 485 aaPredicted RBP7.18□□□□□ -1.26
RIF1-201ENST00000243326 TRBV2A0A0J9YWF9 115 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 TSPAN6O43657 245 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 RAB4BP61018 213 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 CATSPEREQ5SY80 951 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 NLGN4YQ8NFZ3 816 aaPredicted RBP7.18□□□□□ -1.26
RIF1-201ENST00000243326 ZNF599Q96NL3 588 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 DPYSL5Q9BPU6 564 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 ENPP5Q9UJA9 477 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 LGALS8O00214 317 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 PPP1R3DO95685 299 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 BPNT1O95861 308 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 HOXA10P31260 410 aaPredicted RBP7.18□□□□□ -1.26
RIF1-201ENST00000243326 DCTP40126 519 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 DNAJB13P59910 316 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 EIF2B1Q14232 305 aaKnown RBP7.18□□□□□ -1.26
RIF1-201ENST00000243326 PDZD11Q5EBL8 140 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 FAM205BPQ63HN1 556 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 APCDD1Q8J025 514 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 OR14K1Q8NGZ2 314 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 POLDIP3Q9BY77 421 aaKnown RBP7.18□□□□□ -1.26
RIF1-201ENST00000243326 ABCG4Q9H172 646 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 DEC1Q9P2X7 70 aa7.18□□□□□ -1.26
RIF1-201ENST00000243326 TPPPO94811 219 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 POP4O95707 220 aaKnown RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 GSRP00390 522 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 LUMP51884 338 aaPredicted RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 EIPR1Q53HC9 387 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 ARSKQ6UWY0 536 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 ARFGAP1Q8N6T3 406 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.17□□□□□ -1.26
RIF1-201ENST00000243326 IRGQQ8WZA9 623 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 PFDN5Q99471 154 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 SLA2Q9H6Q3 261 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 PLSCR3Q9NRY6 295 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 EMC3Q9P0I2 261 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 SIGLEC1Q9BZZ2 1709 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 OTOL1A6NHN0 477 aaPredicted RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 CLDN12P56749 244 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 FKBP1BP68106 108 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 FOXR2Q6PJQ5 311 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CMIPQ8IY22 773 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CASC3O15234 703 aaKnown RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 HSD3B1P14060 373 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 TUBA3CQ13748 450 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 NUDT13Q86X67 352 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 ADGRG5Q8IZF4 528 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 NUP43Q8NFH3 380 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 STK35Q8TDR2 534 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 KLRG1Q96E93 195 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 HHIPL1Q96JK4 782 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.17□□□□□ -1.26
RIF1-201ENST00000243326 RIMS3Q9UJD0 308 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 TLR6Q9Y2C9 796 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 OR6C65A6NJZ3 312 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 NPIPA5E9PKD4 350 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 SNRNP70P08621 437 aaKnown RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 PIN1Q13526 163 aaPredicted RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 SLC44A3Q8N4M1 653 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 OR51B6Q9H340 312 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 NPIPA1Q9UND3 350 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 C4AP0C0L4 1744 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 C4BP0C0L5 1744 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 COL1A2P08123 1366 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 C2orf78A6NCI8 922 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 H3BUI4 141 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CHMP24386 653 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 MPIP34949 423 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 PON3Q15166 354 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 SYT14Q8NB59 555 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 HAVCR2Q8TDQ0 301 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CD180Q99467 661 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 MEMO1Q9Y316 297 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 PCDHGA8Q9Y5G5 932 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CD34P28906 385 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 YBEYP58557 167 aaPredicted RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 RFTN2Q52LD8 501 aaPredicted RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 TFGQ92734 400 aaPredicted RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 ORAI3Q9BRQ5 295 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CCDC88AQ3V6T2 1871 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 TEAD2Q15562 447 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CES4AQ5XG92 561 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 RAB11FIP2Q7L804 512 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CMKLR1Q99788 373 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CACNG6Q9BXT2 260 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 FBXL2Q9UKC9 423 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 TNFSF8P32971 234 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 GALEQ14376 348 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 PYHIN1Q6K0P9 492 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms