RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 PAIP2BQ9ULR5 123 aaKnown RBP20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 DIMT1Q9UNQ2 313 aaKnown RBP20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 LIPT1Q9Y234 373 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 PPM1DO15297 605 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 TBX1O43435 398 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 CSO75390 466 aaKnown RBP20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 IGFBP1P08833 259 aaPredicted RBP20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 MMP11P24347 488 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 STXBP1P61764 594 aaKnown RBP20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 CDK5Q00535 292 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 MLLT11Q13015 90 aaPredicted RBP20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 CEBPEQ15744 281 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 GPR19Q15760 415 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 SPANXN2Q5MJ10 180 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 ZER1Q7Z7L7 766 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 CCDC190Q86UF4 302 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 FLCNQ8NFG4 579 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 SCARF2Q96GP6 870 aaPredicted RBP20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 KIR3DX1Q9H7L2 352 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 KCNK12Q9HB15 430 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 ANKMY1Q9P2S6 941 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 KLHL3Q9UH77 587 aa20.71■□□□□ 0.91
SMARCD2-201ENST00000225742 NINQ8N4C6 2090 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 ANTXRLA6NF34 631 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 PDZK1P1A8MUH7 402 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 AQP9O43315 295 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 ERAL1O75616 437 aaKnown RBP20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 AIFM1O95831 613 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 F3P13726 295 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 TNNI3P19429 210 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 PSMA1P25786 263 aaKnown RBP20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 MPIP34949 423 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 FEN1P39748 380 aaKnown RBP20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 WASP42768 502 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 GIPRP48546 466 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 SMSP52788 366 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 ERVK-21P61565 698 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 GINS1Q14691 196 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 RPE65Q16518 533 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 KLHL22Q53GT1 634 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 STEAP3Q658P3 488 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 OR8K5Q8NH50 307 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 GNPDA2Q8TDQ7 276 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 FAM131CQ96AQ9 280 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 CNRIP1Q96F85 164 aaPredicted RBP20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 TMEM106CQ9BVX2 250 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 SLC17A9Q9BYT1 436 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 ANKRD19PQ9H560 264 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 TRIM45Q9H8W5 580 aaPredicted RBP20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 PRDM8Q9NQV8 689 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 MRPS18AQ9NVS2 196 aaKnown RBP20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 TVP23BQ9NYZ1 205 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 STUB1Q9UNE7 303 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 ATG4BQ9Y4P1 393 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 PCDHGA4Q9Y5G9 962 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 COLEC10Q9Y6Z7 277 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 MYO10Q9HD67 2058 aa20.7■□□□□ 0.9
SMARCD2-201ENST00000225742 SNTNA6NMZ2 147 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 PGRMC2O15173 223 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 EPPINO95925 133 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 HMGN2P05204 90 aaKnown RBP20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 TIE1P35590 1138 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 PRKAG1P54619 331 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 DEFA1P59665 94 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 DEFA3P59666 94 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 FUT5Q11128 374 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 ZNF425Q6IV72 752 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 COMTD1Q86VU5 262 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 OR6T1Q8NGN1 323 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 CHFRQ96EP1 664 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 SLC6A18Q96N87 628 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 ARHGDIGQ99819 225 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 CCDC32Q9BV29 185 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 NDUFB11Q9NX14 153 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 GPSM3Q9Y4H4 160 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 PCDHGB6Q9Y5F9 930 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 MYL12BO14950 172 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 PLRG1O43660 514 aaKnown RBP20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 RAB36O95755 333 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 BUD31P41223 144 aaPredicted RBP20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 TNFRSF4P43489 277 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 MAN2A2P49641 1150 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 DGKEP52429 567 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 COPZ1P61923 177 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 EFNB1P98172 346 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 LRRC32Q14392 662 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 LASP1Q14847 261 aaKnown RBP20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 GPAT3Q53EU6 434 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 MRGPREQ86SM8 312 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 IQCHQ86VS3 1027 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 CACUL1Q86Y37 369 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 POC5Q8NA72 575 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 APOOQ9BUR5 198 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 SLC13A4Q9UKG4 626 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 TRAPPC4Q9Y296 219 aa20.69■□□□□ 0.9
SMARCD2-201ENST00000225742 A0A1W2PQU0 124 aa20.68■□□□□ 0.9
SMARCD2-201ENST00000225742 C4orf51C9J302 202 aa20.68■□□□□ 0.9
SMARCD2-201ENST00000225742 PROM1O43490 865 aa20.68■□□□□ 0.9
SMARCD2-201ENST00000225742 IFNA8P32881 189 aa20.68■□□□□ 0.9
SMARCD2-201ENST00000225742 TRAM2Q15035 370 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms