RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Zfp969A2ART2 485 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zfp973A2BE20 318 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr543E9PWI5 336 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Bhlhe40O35185 411 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ctla2aP12399 137 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 CtskP55097 329 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tra2bP62996 288 aaKnown RBP12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gpr39Q5U431 456 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Osgepl1Q6PEB4 414 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Trim23Q8BGX0 574 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Lcmt2Q8BYR1 686 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 RbksQ8R1Q9 323 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tmem159Q922Z1 161 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Jph1Q9ET80 660 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Btnl10Q9JK39 275 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm4924A0A1B0GR71 966 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm20547B8JJN0 1276 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm609E9Q573 300 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 IlkO55222 452 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 P01629 112 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 CfbP04186 761 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Efna1P52793 205 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 CtnsP57757 367 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Slc16a3P57787 470 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 AbatP61922 500 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cct3P80318 545 aaKnown RBP12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Apcdd1Q3U128 514 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Bod1Q5SQY2 173 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Q6P1I3 445 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Snx6Q6P8X1 406 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Myl12aQ6ZWQ9 172 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 PxkQ8BX57 582 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 C1raQ8CG16 707 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Nkd1Q99MH6 471 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cxxc1Q9CWW7 660 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 CenpnQ9CZW2 337 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Spns3Q9D232 514 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Krt81Q9ERE2 481 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zfp993A2A8V4 313 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ssxa1B1AUS7 101 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr521E9Q519 321 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm4141K9J7H2 306 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tgfb3P17125 410 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 SnrpgP62309 76 aaKnown RBP12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 IgfalsP70389 603 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Alg10bQ3UGP8 474 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ddx5Q61656 614 aaKnown RBP12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Znf728Q6P5C7 752 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Oog2Q7TPX8 476 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 TiprlQ8BH58 271 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Bnc2Q8BMQ3 1127 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fjx1Q8BQB4 450 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 AntxrlQ8BVM2 641 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Slitrk6Q8C110 840 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr952Q8VFD7 314 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr525Q8VGL5 309 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Asb18Q8VHA6 467 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tcf19Q99KJ5 263 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr955Q9EQ97 314 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ehd3Q9QXY6 535 aa12.03□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cacna1dQ99246 2179 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Sult2a6B2RVI8 285 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm3594E9Q2A7 267 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zfp605E9QAH2 694 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm10799F7C7U2 104 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tgfb1P04202 390 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gabra3P26049 492 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Il1r2P27931 410 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Hoxc11P31313 304 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fpr1P33766 364 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ppm1bP36993 390 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 KapP61110 121 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Q3USZ8 430 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Plekha8Q80W71 519 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 PpcdcQ8BZB2 204 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Dppa4Q8CCG4 296 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Plac9Q8K262 108 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 GaleQ8R059 347 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Hbp1Q8R316 516 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Acsm1Q91VA0 573 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Uck2Q99PM9 261 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ssr2Q9CPW5 183 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tmem179bQ9CY24 219 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Lcn9Q9D267 178 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Lpcat2bQ9D5U0 516 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 1700034I23RikQ9D9Q3 184 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fam122aQ9DB52 284 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Herpud2Q9JJC9 404 aa12.02□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zfp352A2AML7 551 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Gm6710A2ART0 554 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Slc43a3A2AVZ9 502 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Xlr5aA2BI45 236 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Adam34A2RSG8 714 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Maml2F6U238 1170 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Vmn2r9K7N6Z8 848 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 AlyrefO08583 255 aaKnown RBP12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Lsm2O35900 95 aaKnown RBP12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Aldh1a7O35945 501 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Prph2P15499 346 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Kcne1P23299 129 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms