RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ndst3Q9EQH7 873 aa13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Zfp825A0A1Y7VK00 292 aa13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Rab11bP46638 218 aa13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 MafbP54841 323 aa13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Pdcd1Q02242 288 aa13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Rhbdf2Q80WQ6 827 aa13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Cpne5Q8JZW4 593 aa13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Ccdc115Q8VE99 180 aaKnown RBP13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Actl11Q9D5V1 1207 aa13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Gm26992S4R1A3 76 aa13.4□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Rad52P43352 420 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 PrkcgP63318 697 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 CenptQ3TJM4 515 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Crtc2Q3U182 692 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Dyrk2Q5U4C9 599 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Crhr2Q60748 411 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Prmt8Q6PAK3 394 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Olfr1036Q7TR85 310 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Znf322Q8BZ89 410 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Ccm2Q8K2Y9 453 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Irf2bplQ8K3X4 775 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Nudt7Q99P30 236 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Cntn1P12960 1020 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Il1r1P13504 576 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 ThpoP40226 356 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Dnajc5P60904 198 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Vipr1P97751 459 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Rsu1Q01730 277 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Gpr165Q3V3A3 455 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Olfr1364Q5SZS9 314 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Rxfp3Q8BGE9 472 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Rab39aQ8BHD0 217 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Rnf170Q8CBG9 286 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Olfr1461Q8VEV7 312 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Q9CPZ3 230 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Lyrm7Q9DA03 104 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Cav2Q9WVC3 162 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Cst9Q9Z0H6 137 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Grcc10O35127 126 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Dpm1O70152 260 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Ugt2b17P17717 530 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Hes5P70120 167 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Tfap2bQ61313 459 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Six3Q62233 333 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 HeltQ7TS99 240 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Barhl2Q8VIB5 384 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Srfbp1Q9CZ91 441 aaKnown RBP13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 GrifinQ9D1U0 144 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Znf536Q8K083 1302 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Kif13bA0A286YCV9 1847 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 NlkO54949 527 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Gm29609Q3UU56 907 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Kctd13Q8BGV7 329 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Gtf3c2Q8BL74 907 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Sec22cQ8BXT9 303 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Kctd20Q8CDD8 419 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Olfr525Q8VGL5 309 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Imp4Q8VHZ7 291 aaKnown RBP13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Psmd8Q9CX56 353 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Padi3Q9Z184 664 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Izumo4D3Z690 227 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Gm3727J3QM54 205 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 LckP06240 509 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 EporP14753 507 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Abcb1aP21447 1276 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Id2P41136 134 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Brcc3P46737 291 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Il9rQ01114 468 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 XkrxQ5GH68 449 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Mtcp1Q60945 107 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Recql5Q8VID5 982 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Hint2Q9D0S9 163 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Ccdc71lE9Q4T4 218 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Gsg1l2M0QWL6 290 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Chek1O35280 476 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Cd2P08920 344 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 NogP97466 232 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Mat2aQ3THS6 395 aaKnown RBP13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Acvr1bQ61271 505 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Hs6st2Q80UW0 612 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 P4htmQ8BG58 503 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Gipc3Q8R5M0 297 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Cops8Q8VBV7 209 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Metap1dQ9CPW9 335 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 UncxO08934 530 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Papss2O88428 621 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Actr1aP61164 376 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Olfr331Q5NC44 324 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Etaa1Q5SVT3 877 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Olfr320Q7TRZ4 306 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Ticam1Q80UF7 732 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Zmpste24Q80W54 475 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Zer1Q80ZJ6 779 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Ofcc1Q8BGX4 166 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Znf410Q8BKX7 478 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Nrip1Q8CBD1 1161 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 BtdQ8CIF4 520 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Olfr1387Q8VFA9 311 aa13.39□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Cx3cl1O35188 395 aa13.38□□□□□ -0.27
Col5a1-201ENSMUST00000028280 Hsd17b3P70385 305 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms