RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FLI1Q01543 452 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 WSCD1Q658N2 575 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF776Q68DI1 518 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 AADACL2Q6P093 401 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ADGRG3Q86Y34 549 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SERPINA12Q8IW75 414 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CPNE4Q96A23 557 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 KCNH6Q9H252 994 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 KIAA1456Q9P272 454 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ACSL5Q9ULC5 683 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 DERAQ9Y315 318 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PRKCGP05129 697 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 C8AP07357 584 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 RAP2AP10114 183 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ABOP16442 354 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 AK4P27144 223 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CAV2P51636 162 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PHYHD1Q5SRE7 291 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 AWAT2Q6E213 333 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SLC22A25Q6T423 547 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 C15orf54Q8N8G6 183 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FBXO25Q8TCJ0 367 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 POLDIP3Q9BY77 421 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ULBP1Q9BZM6 244 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FAM117AQ9C073 453 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SNX15Q9NRS6 342 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 GPATCH2LQ9NWQ4 482 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TVP23BQ9NYZ1 205 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 STUB1Q9UNE7 303 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 RASD1Q9Y272 281 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 DISP2A7MBM2 1401 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 KIAA0355O15063 1070 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TNFSF12O43508 249 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CA12O43570 354 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TK1P04183 234 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PNMTP11086 282 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SNCAP37840 140 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 NKX3-2P78367 333 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CAP1Q01518 475 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PRKCZQ05513 592 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 GPR176Q14439 515 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PEA15Q15121 130 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 EGFLAMQ63HQ2 1017 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM220Q6QAJ8 160 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CERS5Q8N5B7 392 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TNFRSF25Q93038 417 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SGK3Q96BR1 496 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR2M2Q96R28 347 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SPOCK3Q9BQ16 436 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 DUSP26Q9BV47 211 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 GPR62Q9BZJ7 368 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ZNFX1Q9P2E3 1918 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 A0A1W2PS29 197 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 METTL15A6NJ78 407 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 PCDH7O60245 1069 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 AK1P00568 194 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 HRH2P25021 359 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MAT2AP31153 395 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CRYBB1P53674 252 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SUB1P53999 127 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 RAB8AP61006 207 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BLOC1S1P78537 153 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MC2RQ01718 297 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 FAAP100Q0VG06 881 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 GAS6Q14393 721 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 DHRS11Q6UWP2 260 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ENPP7Q6UWV6 458 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CARM1Q86X55 608 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BAGE3Q86Y29 109 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BAGE2Q86Y30 109 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 IQCKQ8N0W5 287 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MUC15Q8N387 334 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 KIAA1958Q8N8K9 716 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 IL17REQ8NFR9 667 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BEST4Q8NFU0 473 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR4K2Q8NGD2 314 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR5K2Q8NHB8 316 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 FAM110BQ8TC76 370 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 GJD4Q96KN9 370 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM246Q9BRR3 403 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 NTPCRQ9BSD7 190 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CHRNA9Q9UGM1 479 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM2Q9UHN6 1383 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM218A2RU14 115 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR5K4A6NMS3 321 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 A8MU76 341 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CNIH1O95406 144 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 S100A4P26447 101 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 HOXD12P35452 270 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 NRLP54845 237 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 FADDQ13158 208 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 UBAP2LQ14157 1087 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SF3A2Q15428 464 aaKnown RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 CDC42EP5Q6NZY7 148 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ANKRD23Q86SG2 305 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 BPHLQ86WA6 291 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MAML2Q8IZL2 1156 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF454Q8N9F8 522 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 Q8N9G6 341 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms