RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 GLTPQ9NZD2 209 aa13.16□□□□□ -0.3
UBE3A-209ENST00000625778 KLHL21Q9UJP4 597 aa13.16□□□□□ -0.3
UBE3A-209ENST00000625778 ADAP00813 363 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 STATHP02808 62 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 PKLRP30613 574 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 SRP9P49458 86 aaKnown RBP13.15□□□□□ -0.3
UBE3A-209ENST00000625778 DGKGP49619 791 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 AP1S2P56377 157 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 WNT4P56705 351 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 NUMA1Q14980 2115 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 TCTN3Q6NUS6 607 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 CFAP77Q6ZQR2 320 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 TPRG1Q6ZUI0 275 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 ZNF767PQ75MW2 155 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 LRRC17Q8N6Y2 441 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 OR4D11Q8NGI4 311 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 C16orf78Q8WTQ4 265 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 SLC38A5Q8WUX1 472 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 PLD4Q96BZ4 506 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 NKIRAS2Q9NYR9 191 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 RGS17Q9UGC6 210 aaPredicted RBP13.15□□□□□ -0.3
UBE3A-209ENST00000625778 NCKAP1Q9Y2A7 1128 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 ARPC4-TTLL3A0A0A6YYG9 625 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 ANHXE9PGG2 379 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 FRS3O43559 492 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 DPM1O60762 260 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 KCNJ13O60928 360 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 SERPIND1P05546 499 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 CTRB1P17538 263 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 CTSCP53634 463 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 ABATP80404 500 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 ZSWIM7Q19AV6 140 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 CLVS2Q5SYC1 327 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 MEDAGQ5VYS4 303 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 METTL2BQ6P1Q9 378 aaKnown RBP13.15□□□□□ -0.3
UBE3A-209ENST00000625778 GPR32P1Q8NGA4 272 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 OR5D16Q8NGK9 328 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.15□□□□□ -0.31e-8■■□□□ 13.6
UBE3A-209ENST00000625778 UPF1Q92900 1129 aaKnown RBP eCLIP13.15□□□□□ -0.3
UBE3A-209ENST00000625778 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 MAGEB10Q96LZ2 347 aaPredicted RBP13.15□□□□□ -0.3
UBE3A-209ENST00000625778 FNDC11Q9BVV2 318 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 NUDT15Q9NV35 164 aa13.15□□□□□ -0.3
UBE3A-209ENST00000625778 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.15□□□□□ -0.31
UBE3A-209ENST00000625778 RECKO95980 971 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 CATP04040 527 aaKnown RBP13.15□□□□□ -0.31
UBE3A-209ENST00000625778 PDGFAP04085 211 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 BUD31P41223 144 aaPredicted RBP13.15□□□□□ -0.31
UBE3A-209ENST00000625778 TAGLNQ01995 201 aaKnown RBP13.15□□□□□ -0.31
UBE3A-209ENST00000625778 CDKN3Q16667 212 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 GRHL2Q6ISB3 625 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 PODNL1Q6PEZ8 512 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 HSDL2Q6YN16 418 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 IDO2Q6ZQW0 420 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 KCTD20Q7Z5Y7 419 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 ANGPTL6Q8NI99 470 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 CHTF18Q8WVB6 975 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 ZNF582Q96NG8 517 aaPredicted RBP13.15□□□□□ -0.31
UBE3A-209ENST00000625778 SPNS1Q9H2V7 528 aa13.15□□□□□ -0.31
UBE3A-209ENST00000625778 USP34Q70CQ2 3546 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 PLXNA4Q9HCM2 1894 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 EEF1E1O43324 174 aaKnown RBP13.14□□□□□ -0.31
UBE3A-209ENST00000625778 LANCL1O43813 399 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 AKAP8O43823 692 aaKnown RBP13.14□□□□□ -0.31
UBE3A-209ENST00000625778 GPR37L1O60883 481 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 LALBAP00709 142 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 FURINP09958 794 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 OR12D1P0DN82 309 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 ARAFP10398 606 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 PIPP12273 146 aaPredicted RBP13.14□□□□□ -0.31
UBE3A-209ENST00000625778 ITGB7P26010 798 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 AGFG1P52594 562 aaKnown RBP13.14□□□□□ -0.31
UBE3A-209ENST00000625778 WDR5P61964 334 aaKnown RBP13.14□□□□□ -0.31
UBE3A-209ENST00000625778 PPP3R1P63098 170 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 RPL6Q02878 288 aaKnown RBP13.14□□□□□ -0.31
UBE3A-209ENST00000625778 CLDN22Q8N7P3 220 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 DCAF4L2Q8NA75 395 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 METTL2AQ96IZ6 378 aaKnown RBP13.14□□□□□ -0.31
UBE3A-209ENST00000625778 NRTNQ99748 197 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 PLA2G12AQ9BZM1 189 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 ABCG5Q9H222 651 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 KLHL1Q9NR64 748 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 LRFN2Q9ULH4 789 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 PLAGL1Q9UM63 463 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 GFYI3L273 518 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 CKMP06732 381 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 GJA1P17302 382 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 IMPA1P29218 277 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 ZNF81P51508 661 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 DCDC1P59894 354 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 LMAN2Q12907 356 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 ILKQ13418 452 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
UBE3A-209ENST00000625778 FAM122CQ6P4D5 195 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 Q6ZVU0 165 aa13.14□□□□□ -0.31
UBE3A-209ENST00000625778 CREB3L2Q70SY1 520 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms