RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 SH3D21A4FU49 640 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 SOX2P48431 317 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 PHC1P78364 1004 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 GRIN2CQ14957 1233 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 UBE2Q1Q7Z7E8 422 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 OR5T2Q8NGG2 359 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 TCEAL4Q96EI5 215 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 PRR11Q96HE9 360 aaPredicted RBP14.9□□□□□ -0.02
TNXB-208ENST00000611016 MSLNLQ96KJ4 702 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 NKX1-2Q9UD57 310 aaPredicted RBP14.9□□□□□ -0.02
TNXB-208ENST00000611016 NUFIP1Q9UHK0 495 aaKnown RBP14.9□□□□□ -0.02
TNXB-208ENST00000611016 ACSL6Q9UKU0 697 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 OR6C70A6NIJ9 312 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 SOCS2O14508 198 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 SMAD6O43541 496 aaKnown RBP14.9□□□□□ -0.02
TNXB-208ENST00000611016 GSTM2P28161 218 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 GMPRP36959 345 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 SRYQ05066 204 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 CRYZQ08257 329 aaKnown RBP14.9□□□□□ -0.02
TNXB-208ENST00000611016 BCL7BQ9BQE9 202 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 FARSAQ9Y285 508 aaKnown RBP14.9□□□□□ -0.02
TNXB-208ENST00000611016 NOP16Q9Y3C1 178 aaKnown RBP14.9□□□□□ -0.02
TNXB-208ENST00000611016 TAS2R38P59533 333 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 UGT3A2Q3SY77 523 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 C3P1Q6ZMU1 363 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 C3orf58Q8NDZ4 430 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 ASB15Q8WXK1 588 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 THAP4Q8WY91 577 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 DMRTB1Q96MA1 342 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 LPAR4Q99677 370 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 ZFYVE21Q9BQ24 234 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 ZNF559Q9BR84 538 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 KATNBL1Q9H079 304 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 EVA1AQ9H8M9 152 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 PELI2Q9HAT8 420 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 SRA1Q9HD15 236 aaKnown RBP14.9□□□□□ -0.02
TNXB-208ENST00000611016 GJD2Q9UKL4 321 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 NFS1Q9Y697 457 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 SLC22A31A6NKX4 558 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 LRRTM2O43300 516 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 SLC16A8O95907 504 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 ANKDD1AQ495B1 522 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 FOXRED2Q8IWF2 684 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 TOE1Q96GM8 510 aaKnown RBP14.9□□□□□ -0.02
TNXB-208ENST00000611016 WDR37Q9Y2I8 494 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 MYH13Q9UKX3 1938 aa14.9□□□□□ -0.02
TNXB-208ENST00000611016 CD68P34810 354 aaPredicted RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 ZNF252P-AS1Q0IIN9 211 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 BNIP3Q12983 259 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 RPA4Q13156 261 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 ZER1Q7Z7L7 766 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 SEC14L1Q92503 715 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 ZC3H10Q96K80 434 aaKnown RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 SLC46A2Q9BY10 475 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 ANKMY1Q9P2S6 941 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 SLC7A11Q9UPY5 501 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 VSTM2BA6NLU5 285 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 CXCL12P48061 93 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 FAM76BQ5HYJ3 339 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 TOR1AIP2Q8NFQ8 470 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 NELFAQ9H3P2 528 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 ATXN7L1Q9ULK2 861 aaPredicted RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 AP1M2Q9Y6Q5 423 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 MRPS14O60783 128 aaKnown RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 DNAJB6O75190 326 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 HRGP04196 525 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 LCN1P31025 176 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 RHEBQ15382 184 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 MARCH8Q5T0T0 291 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 CCSAPQ6IQ19 270 aaPredicted RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 C16orf78Q8WTQ4 265 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 C12orf43Q96C57 262 aaKnown RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 CRYBG1Q9Y4K1 1723 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 KAT6AQ92794 2004 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 SCGB2A1O75556 95 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 ITGB7P26010 798 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 RBMXP38159 391 aaKnown RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 NOVP48745 357 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 LYSMD4Q5XG99 296 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 CDHR3Q6ZTQ4 885 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.89□□□□□ -0.03
TNXB-208ENST00000611016 ZNF675Q8TD23 568 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 KCNIP3Q9Y2W7 256 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 RGPD2P0DJD1 1756 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 CPNE6O95741 557 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 NAA10P41227 235 aaPredicted RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 DLX2Q07687 328 aaPredicted RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 ACVR1CQ8NER5 493 aa14.89□□□□□ -0.03
TNXB-208ENST00000611016 URM1Q9BTM9 101 aaKnown RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 RBMX2Q9Y388 322 aaKnown RBP14.89□□□□□ -0.03
TNXB-208ENST00000611016 BORCS7-ASMTA0A0B4J1R7 106 aa14.88□□□□□ -0.03
TNXB-208ENST00000611016 SMAD9O15198 467 aaKnown RBP14.88□□□□□ -0.03
TNXB-208ENST00000611016 RAD51DO75771 328 aa14.88□□□□□ -0.03
TNXB-208ENST00000611016 PSMA6P60900 246 aaKnown RBP14.88□□□□□ -0.03
TNXB-208ENST00000611016 HSD17B12Q53GQ0 312 aa14.88□□□□□ -0.03
TNXB-208ENST00000611016 KANK2Q63ZY3 851 aa14.88□□□□□ -0.03
TNXB-208ENST00000611016 LARP4Q71RC2 724 aaKnown RBP eCLIP14.88□□□□□ -0.03
TNXB-208ENST00000611016 STOML3Q8TAV4 291 aa14.88□□□□□ -0.03
TNXB-208ENST00000611016 ZNF431Q8TF32 576 aaPredicted RBP14.88□□□□□ -0.03
TNXB-208ENST00000611016 L3HYPDHQ96EM0 354 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms