RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ZNF10P21506 573 aaPredicted RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 BCKDHBP21953 392 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 PCMT1P22061 227 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 CBLP22681 906 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 CERS1P27544 350 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 FMO3P31513 532 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 HOXD12P35452 270 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 KRT20P35900 424 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 NUDT1P36639 197 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 RABIFP47224 123 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 KCNJ5P48544 419 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 CRISP3P54108 245 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 CASP9P55211 416 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 CLDN2P57739 230 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 SRP54P61011 504 aaKnown RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 RPP38P78345 283 aaKnown RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 PRR5P85299 388 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 SHC2P98077 582 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 RELAQ04206 551 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 ILF3Q12906 894 aaKnown RBP eCLIP9.39□□□□□ -0.91
VPS25-202ENST00000589219 SLAMF1Q13291 335 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 DCTN2Q13561 401 aaKnown RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 CEBPEQ15744 281 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 PRRT3Q5FWE3 981 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 COLEC12Q5KU26 742 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 MLIPQ5VWP3 458 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 SLC48A1Q6P1K1 146 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 SLC5A8Q8N695 610 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 SMYD1Q8NB12 490 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 TMEM145Q8NBT3 493 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 OR8K5Q8NH50 307 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 SUN3Q8TAQ9 357 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 NR4A3Q92570 626 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 PIGKQ92643 395 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 RORBQ92753 470 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 ZNF354BQ96LW1 612 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 FEVQ99581 238 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 CCDC90BQ9GZT6 254 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 OR51I1Q9H343 314 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 PLCXD1Q9NUJ7 323 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 POT1Q9NUX5 634 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 PAK1IP1Q9NWT1 392 aaPredicted RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 CALML5Q9NZT1 146 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 USP36Q9P275 1121 aaKnown RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 C5AR2Q9P296 337 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 ENPP5Q9UJA9 477 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 TMCC3Q9ULS5 477 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 PCDHGA6Q9Y5G7 932 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 KLK4Q9Y5K2 254 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 GPC6Q9Y625 555 aaPredicted RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 HS3ST3A1Q9Y663 406 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 TNRC6BQ9UPQ9 1833 aaKnown RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 CACNA1BQ00975 2339 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 A0A0G2JN53 185 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 PRAMEF25A6NGN4 478 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 C4orf51C9J302 202 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 BTN3A3O00478 584 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 CASC3O15234 703 aaKnown RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 EMC8O43402 210 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 TNFSF14O43557 240 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 XPNPEP2O43895 674 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 B4GALT2O60909 372 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 NDUFS2O75306 463 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ZNF217O75362 1048 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 GABARAPO95166 117 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ATE1O95260 518 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 RASGRP1O95267 797 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 SEMA4FO95754 770 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 RECKO95980 971 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 IGLV3-19P01714 112 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 MATN1P21941 496 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 BUD31P41223 144 aaPredicted RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 OR1E2P47887 323 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 NOVA1P51513 510 aaKnown RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 TPMTP51580 245 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 CCR5P51681 352 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 RPS26P62854 115 aaKnown RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 HPCAP84074 193 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 TNFRSF17Q02223 184 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 NFATC3Q12968 1075 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 NPTX1Q15818 432 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ALG11Q2TAA5 492 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 RPS26P11Q5JNZ5 115 aaPredicted RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 LYSMD4Q5XG99 296 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 SZRD1Q7Z422 152 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 RABEPKQ7Z6M1 372 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ABI3BPQ7Z7G0 1075 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ANKRD13BQ86YJ7 626 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 CROCCP3Q8IVE0 287 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 TRIM48Q8IWZ4 208 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 TMEFF1Q8IYR6 380 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ENTHD1Q8IYW4 607 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 LINC00471Q8N535 108 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 AMER3Q8N944 861 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ZNF540Q8NDQ6 660 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 GPR32P1Q8NGA4 272 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 CEP76Q8TAP6 659 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 FAM81AQ8TBF8 368 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 FAR1Q8WVX9 515 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms