RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 CNOT11Q9UKZ1 510 aaKnown RBP15.61■□□□□ 0.09
TRIM47-203ENST00000586495 NFU1Q9UMS0 254 aa15.61■□□□□ 0.09
TRIM47-203ENST00000586495 CFL2Q9Y281 166 aa15.61■□□□□ 0.09
TRIM47-203ENST00000586495 PCDHA9Q9Y5H5 950 aa15.61■□□□□ 0.09
TRIM47-203ENST00000586495 PHF3Q92576 2039 aaKnown RBP15.6■□□□□ 0.09
TRIM47-203ENST00000586495 A0A1W2PS29 197 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 FAM90A27PA6NNH2 459 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 FOXO6A8MYZ6 492 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 PPP6CO00743 305 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 SUPT7LO94864 414 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 OR4F21O95013 312 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 KRT6AP02538 564 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 KRT6BP04259 564 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 CT62P0C5K7 136 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 RFPL3SP0C7P2 107 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 HSD3B1P14060 373 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 TSPAN8P19075 237 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 HSD3B2P26439 372 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 HSD17B3P37058 310 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 KRT6CP48668 564 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 TRA2BP62995 288 aaKnown RBP15.6■□□□□ 0.09
TRIM47-203ENST00000586495 RASA2Q15283 850 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 RPS6KA2Q15349 733 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 CCDC71Q8IV32 467 aaPredicted RBP15.6■□□□□ 0.09
TRIM47-203ENST00000586495 LRRC25Q8N386 305 aaPredicted RBP15.6■□□□□ 0.09
TRIM47-203ENST00000586495 ZNF615Q8N8J6 731 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 C17orf47Q8NEP4 570 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 ZNF597Q96LX8 424 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 SECISBP2Q96T21 854 aaKnown RBP15.6■□□□□ 0.09
TRIM47-203ENST00000586495 TREX2Q9BQ50 279 aaPredicted RBP15.6■□□□□ 0.09
TRIM47-203ENST00000586495 FAIM2Q9BWQ8 316 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 PROK2Q9HC23 129 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 ALKBH4Q9NXW9 302 aa15.6■□□□□ 0.09
TRIM47-203ENST00000586495 A0A1B0GTL3 188 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 FAM47E-STBD1D6RA91 191 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 ERAL1O75616 437 aaKnown RBP15.59■□□□□ 0.09
TRIM47-203ENST00000586495 SNX4O95219 450 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 KRT15P19012 456 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 CSNK2A2P19784 350 aaPredicted RBP15.59■□□□□ 0.09
TRIM47-203ENST00000586495 CAPN3P20807 821 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 ATP5F1P24539 256 aaPredicted RBP15.59■□□□□ 0.09
TRIM47-203ENST00000586495 ZFP36L2P47974 494 aaKnown RBP15.59■□□□□ 0.09
TRIM47-203ENST00000586495 GALNT1Q10472 559 aaPredicted RBP15.59■□□□□ 0.09
TRIM47-203ENST00000586495 MAP4K2Q12851 820 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 ZNF678Q5SXM1 525 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 SLC22A9Q8IVM8 553 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 VWA5B2Q8N398 1253 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 NEIL3Q8TAT5 605 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 ADIPOR1Q96A54 375 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 TM4SF18Q96CE8 201 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 UCK2Q9BZX2 261 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 BRINP2Q9C0B6 783 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 TMEM216Q9P0N5 145 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 TNFRSF10DQ9UBN6 386 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 VPS29Q9UBQ0 182 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 CES1P1Q9UKY3 287 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 STK38LQ9Y2H1 464 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 PCDHGB3Q9Y5G1 929 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 FAM215AQ9Y5M1 114 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 NINQ8N4C6 2090 aa15.59■□□□□ 0.09
TRIM47-203ENST00000586495 NKX2-6A6NCS4 301 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 LRRC3CA6NJW4 275 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 RIPK2O43353 540 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 CDH16O75309 829 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 TOXO94900 526 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 LRATO95237 230 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 ATP1B1P05026 303 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 GLI4P10075 376 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 GDF1P27539 372 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 GCAP28676 217 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 HMOX2P30519 316 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 FBXW4P57775 412 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 TLE4Q04727 773 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 CSTF3Q12996 717 aaKnown RBP15.58■□□□□ 0.08
TRIM47-203ENST00000586495 UNC50Q53HI1 259 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 C1orf185Q5T7R7 199 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 TMEM64Q6YI46 380 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 C1orf52Q8N6N3 182 aaKnown RBP15.58■□□□□ 0.08
TRIM47-203ENST00000586495 CDYL2Q8N8U2 506 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 SPPL2AQ8TCT8 520 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 ACMSDQ8TDX5 336 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 SLC24A3Q9HC58 644 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 BCAP29Q9UHQ4 241 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 ZNF225Q9UK10 706 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 ZNF780BQ9Y6R6 833 aa15.58■□□□□ 0.08
TRIM47-203ENST00000586495 ABCA12Q86UK0 2595 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 MANBAO00462 879 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 DLX3O60479 287 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 TRIM3O75382 744 aaPredicted RBP15.57■□□□□ 0.08
TRIM47-203ENST00000586495 ULK1O75385 1050 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 ESRRBO95718 433 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 GSTA1P08263 222 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 NAGAP17050 411 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 IGFBP2P18065 325 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 IMPDH1P20839 514 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 ENDOUP21128 410 aaKnown RBP15.57■□□□□ 0.08
TRIM47-203ENST00000586495 S1PR1P21453 382 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 MSX1P28360 303 aa15.57■□□□□ 0.08
TRIM47-203ENST00000586495 FEN1P39748 380 aaKnown RBP15.57■□□□□ 0.08
TRIM47-203ENST00000586495 MASP1P48740 699 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms