RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SRFBP1Q8NEF9 429 aaKnown RBP10.69□□□□□ -0.7
TOP3A-217ENST00000584582 ZNF420Q8TAQ5 688 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-217ENST00000584582 RIPOR3Q96MK2 946 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 FBXL21Q9UKT6 434 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 DOCK9Q9BZ29 2069 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 B3GALT2O43825 422 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 SCN2BO60939 215 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 SOX30O94993 753 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 SOD1P00441 154 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 PTHP01270 115 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 BMP7P18075 431 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 HIST1H1TP22492 207 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-217ENST00000584582 RPL4P36578 427 aaKnown RBP10.69□□□□□ -0.7
TOP3A-217ENST00000584582 GP2P55259 537 aaKnown RBP10.69□□□□□ -0.7
TOP3A-217ENST00000584582 TAS2R38P59533 333 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 RPE65Q16518 533 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 TBC1D15Q8TC07 691 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 OR1E3Q8WZA6 343 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 RBM18Q96H35 190 aaKnown RBP10.69□□□□□ -0.7
TOP3A-217ENST00000584582 COX4I2Q96KJ9 171 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 OR5M11Q96RB7 305 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 MCHR1Q99705 422 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 ACOT13Q9NPJ3 140 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 NLGN3Q9NZ94 848 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 HCN3Q9P1Z3 774 aa10.69□□□□□ -0.7
TOP3A-217ENST00000584582 CAB39Q9Y376 341 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-217ENST00000584582 NLRC5Q86WI3 1866 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 AIFM1O95831 613 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 RPLP0P05388 317 aaKnown RBP10.68□□□□□ -0.7
TOP3A-217ENST00000584582 MRPL3P09001 348 aaKnown RBP10.68□□□□□ -0.7
TOP3A-217ENST00000584582 CHMP24386 653 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 PSMA1P25786 263 aaKnown RBP10.68□□□□□ -0.7
TOP3A-217ENST00000584582 FCHO2Q0JRZ9 810 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 AQP6Q13520 282 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 EXOSC7Q15024 291 aaKnown RBP10.68□□□□□ -0.7
TOP3A-217ENST00000584582 MOGQ16653 247 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 ADPRMQ3LIE5 342 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 CRTC2Q53ET0 693 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-217ENST00000584582 AGBL4Q5VU57 503 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 FAAH2Q6GMR7 532 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 TRIM69Q86WT6 500 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 CALHM3Q86XJ0 350 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 ETFBKMTQ8IXQ9 262 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 CDK20Q8IZL9 346 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 SYNPOQ8N3V7 929 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 SLC38A2Q96QD8 506 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 MARK1Q9P0L2 795 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 COMMD3Q9UBI1 195 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 RPS6KB2Q9UBS0 482 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 SNX7Q9UNH6 387 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 NOTCH4Q99466 2003 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 PRSS38A1L453 326 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 FAM25AB3EWG3 89 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 FAM25CB3EWG5 89 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 FAM25GB3EWG6 89 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 TMCC2O75069 709 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 RHCEP18577 417 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 RBBP4Q09028 425 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 SRSF5Q13243 272 aaKnown RBP10.68□□□□□ -0.7
TOP3A-217ENST00000584582 TMEM196Q5HYL7 178 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 KDM4DQ6B0I6 523 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 FRMPD2BQ6IN97 320 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 Q6ZSR6 202 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 IGFN1Q86VF2 1251 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 SLC22A16Q86VW1 577 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 OR5T3Q8NGG3 340 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 OR51L1Q8NGJ5 315 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 ZG16BQ96DA0 208 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 MTERF3Q96E29 417 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 AHCYL2Q96HN2 611 aaKnown RBP10.68□□□□□ -0.7
TOP3A-217ENST00000584582 WDR92Q96MX6 357 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 GAL3ST4Q96RP7 486 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 TMED9Q9BVK6 235 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 SGPP1Q9BX95 441 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 CFHR5Q9BXR6 569 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 MCOLN1Q9GZU1 580 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 EGLN3Q9H6Z9 239 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 LIPAP38571 399 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 EPHA5P54756 1037 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 SMIM11AP58511 58 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 MRPS15P82914 257 aaKnown RBP10.68□□□□□ -0.7
TOP3A-217ENST00000584582 MPEG1Q2M385 716 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 PROX2Q3B8N5 592 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 FAM111BQ6SJ93 734 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 OR6T1Q8NGN1 323 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 UBASH3BQ8TF42 649 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 GGHQ92820 318 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 ASIC5Q9NY37 505 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 PTGFRNQ9P2B2 879 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 ENOPH1Q9UHY7 261 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 PCDHGA6Q9Y5G7 932 aa10.68□□□□□ -0.7
TOP3A-217ENST00000584582 C17orf113A0A1B0GUU1 675 aa10.67□□□□□ -0.7
TOP3A-217ENST00000584582 A0A1W2PPK0 400 aa10.67□□□□□ -0.7
TOP3A-217ENST00000584582 FOXE1O00358 373 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-217ENST00000584582 CASKO14936 926 aa10.67□□□□□ -0.7
TOP3A-217ENST00000584582 NPC1O15118 1278 aa10.67□□□□□ -0.7
TOP3A-217ENST00000584582 SLC22A1O15245 554 aa10.67□□□□□ -0.7
TOP3A-217ENST00000584582 JRKO75564 520 aa10.67□□□□□ -0.7
TOP3A-217ENST00000584582 HOXA9P31269 272 aa10.67□□□□□ -0.7
TOP3A-217ENST00000584582 AKT2P31751 481 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms