RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TAGAPQ8N103 731 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 ZCCHC10Q8TBK6 192 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 PHF10Q8WUB8 498 aaKnown RBP21.34■■□□□ 1.01
CCDC47-204ENST00000582252 CNDP2Q96KP4 475 aaKnown RBP21.34■■□□□ 1.01
CCDC47-204ENST00000582252 BTBD2Q9BX70 525 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 MIR1-1HGQ9H1L0 117 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 BCL2L10Q9HD36 194 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 SCN3BQ9NY72 215 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 FBXO4Q9UKT5 387 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 TPRKBQ9Y3C4 175 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 GPC6Q9Y625 555 aaPredicted RBP21.34■■□□□ 1.01
CCDC47-204ENST00000582252 SLCO1B1Q9Y6L6 691 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 A0A1W2PR77 199 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 ASNA1O43681 348 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 CCNB2O95067 398 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 JUNDP17535 347 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 KCNJ5P48544 419 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 TMEM107Q6UX40 140 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 BMP8AQ7Z5Y6 402 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 ZNF420Q8TAQ5 688 aaPredicted RBP21.33■■□□□ 1.01
CCDC47-204ENST00000582252 ZNF681Q96N22 645 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 COL21A1Q96P44 957 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 FEVQ99581 238 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 TREX2Q9BQ50 279 aaPredicted RBP21.33■■□□□ 1.01
CCDC47-204ENST00000582252 LYRM4Q9HD34 91 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 CALML5Q9NZT1 146 aa21.33■■□□□ 1.01
CCDC47-204ENST00000582252 OR5K3A6NET4 321 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 PRAMEF25A6NGN4 478 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 ENO4A6NNW6 628 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 C8orf89P0DMQ9 161 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 ALOX12P18054 663 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 MAOBP27338 520 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 SMIM11AP58511 58 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 LASP1Q14847 261 aaKnown RBP21.32■■□□□ 1
CCDC47-204ENST00000582252 SYPL1Q16563 259 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 COLEC12Q5KU26 742 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 LRRC25Q8N386 305 aaPredicted RBP21.32■■□□□ 1
CCDC47-204ENST00000582252 FAM46DQ8NEK8 389 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 NUP43Q8NFH3 380 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 OR5D16Q8NGK9 328 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 GAB3Q8WWW8 586 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 ACER3Q9NUN7 267 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 KCND3Q9UK17 655 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 HCN4Q9Y3Q4 1203 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 A0A0G2JPF8 293 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 WASHC1A8K0Z3 465 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 HNRNPCL2B2RXH8 293 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 HNRNPCL3B7ZW38 293 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 H0YGG7 62 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 P2RX6O15547 441 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 NOL3O60936 208 aaKnown RBP21.32■■□□□ 1
CCDC47-204ENST00000582252 HMGN2P05204 90 aaKnown RBP21.32■■□□□ 1
CCDC47-204ENST00000582252 HNRNPCL4P0DMR1 293 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 ARF3P61204 181 aaPredicted RBP21.32■■□□□ 1
CCDC47-204ENST00000582252 LSAMPQ13449 338 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 TUBA3CQ13748 450 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 RAB39AQ14964 217 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 ELOCQ15369 112 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 MAPK11Q15759 364 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 GPR19Q15760 415 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 CYP27C1Q4G0S4 372 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 KLHL35Q6PF15 583 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 FAM92BQ6ZTR7 304 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 CLVS1Q8IUQ0 354 aaPredicted RBP21.32■■□□□ 1
CCDC47-204ENST00000582252 OR4K14Q8NGD5 310 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 OR52J3Q8NH60 311 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 C1orf216Q8TAB5 229 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 APOBEC4Q8WW27 367 aaKnown RBP21.32■■□□□ 1
CCDC47-204ENST00000582252 ELP4Q96EB1 424 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 HRASLS5Q96KN8 279 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 CXorf21Q9HAI6 301 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 TMCC3Q9ULS5 477 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 DAPP1Q9UN19 280 aa21.32■■□□□ 1
CCDC47-204ENST00000582252 B4GAT1O43505 415 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 AGR2O95994 175 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 CELA2BP08218 269 aaPredicted RBP21.31■■□□□ 1
CCDC47-204ENST00000582252 LIMS1P48059 325 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 LIM2P55344 173 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 CSNK2BP67870 215 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 RPP38P78345 283 aaKnown RBP21.31■■□□□ 1
CCDC47-204ENST00000582252 ROR2Q01974 943 aaKnown RBP21.31■■□□□ 1
CCDC47-204ENST00000582252 PMS2P3Q13401 168 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 NEDD8Q15843 81 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 DEFB134Q4QY38 66 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 SLC5A8Q8N695 610 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 BPIFB6Q8NFQ5 453 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 MPP4Q96JB8 637 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 TRIM45Q9H8W5 580 aaPredicted RBP21.31■■□□□ 1
CCDC47-204ENST00000582252 KCMF1Q9P0J7 381 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 LIPT1Q9Y234 373 aa21.31■■□□□ 1
CCDC47-204ENST00000582252 E9PQ18 207 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 J3KTA2 159 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 TLR4O00206 839 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 MRPS14O60783 128 aaKnown RBP21.3■■□□□ 1
CCDC47-204ENST00000582252 WNT1P04628 370 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 C1orf61Q13536 156 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 PUM1Q14671 1186 aaKnown RBP eCLIP21.3■■□□□ 12e-6■□□□□ 10.8
CCDC47-204ENST00000582252 ZNF750Q32MQ0 723 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 ATAD3BQ5T9A4 648 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 GPR32P1Q8NGA4 272 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms