RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PGS1Q32NB8 556 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 AGKQ53H12 422 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 OR4F3Q6IEY1 312 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 ANKRD26P1Q6NSI1 321 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 JMJD6Q6NYC1 403 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 BHLHB9Q6PI77 547 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 CCDC81Q6ZN84 652 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 APLFQ8IW19 511 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 TMEM151BQ8IW70 566 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 OR4N5Q8IXE1 308 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 CCDC116Q8IYX3 515 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 OR2L13Q8N349 312 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 DPP10Q8N608 796 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 APCDD1LQ8NCL9 501 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 C17orf47Q8NEP4 570 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 OR1N1Q8NGS0 311 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 RP9Q8TA86 221 aaKnown RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 SFXN5Q8TD22 340 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 CIDECQ96AQ7 238 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 VMP1Q96GC9 406 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 OR52E6Q96RD3 313 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 MMP25Q9NPA2 562 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 SERHLQ9NQF3 203 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 SIRT3Q9NTG7 399 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 TAS2R9Q9NYW1 312 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 COPS7AQ9UBW8 275 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 PCDHGB4Q9UN71 923 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 CFL2Q9Y281 166 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 SCN2AQ99250 2005 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 A0A1W2PS29 197 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 TTC36A6NLP5 189 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 PRAMEF2O60811 474 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 COQ9O75208 318 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 ERN1O75460 977 aaKnown RBP9.69□□□□□ -0.86
CCDC47-203ENST00000580986 CAPN3P20807 821 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 S1PR1P21453 382 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 NT5EP21589 574 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 SOX18P35713 384 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 NME5P56597 212 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 HBA1P69905 142 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 PRR5P85299 388 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 ID2Q02363 134 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 STX5Q13190 355 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 ATP1A4Q13733 1029 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 UBAP2LQ14157 1087 aaKnown RBP9.69□□□□□ -0.86
CCDC47-203ENST00000580986 TLR1Q15399 786 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 ZNF750Q32MQ0 723 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 TIGD2Q4W5G0 525 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 DCAF10Q5QP82 559 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 LRIF1Q5T3J3 769 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 FHL5Q5TD97 284 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 FAM69BQ5VUD6 431 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 ZCCHC12Q6PEW1 402 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 TREML4Q6UXN2 200 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 LGI4Q8N135 537 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 TRIML2Q8N7C3 387 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 CLEC1AQ8NC01 280 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 OR9A2Q8NGT5 310 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 SLC2A12Q8TD20 617 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 ELP5Q8TE02 316 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 ZNF721Q8TF20 911 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 GTF2H4Q92759 462 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 PCSK5Q92824 1860 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 HOXB13Q92826 284 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-203ENST00000580986 CMTM5Q96DZ9 223 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 ELP4Q96EB1 424 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 SENP5Q96HI0 755 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-203ENST00000580986 NAF1Q96HR8 494 aaKnown RBP9.69□□□□□ -0.86
CCDC47-203ENST00000580986 ITCHQ96J02 903 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 PNO1Q9NRX1 252 aaKnown RBP9.69□□□□□ -0.86
CCDC47-203ENST00000580986 LEF1Q9UJU2 399 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-203ENST00000580986 FBXL4Q9UKA2 621 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 G3BP2Q9UN86 482 aaKnown RBP9.69□□□□□ -0.86
CCDC47-203ENST00000580986 C19orf53Q9UNZ5 99 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-203ENST00000580986 RAXQ9Y2V3 346 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 NDUFAF1Q9Y375 327 aa9.69□□□□□ -0.86
CCDC47-203ENST00000580986 A0A096LPI6 279 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 ASPDHA6ND91 283 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 TAF4O00268 1085 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 NR5A2O00482 541 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 RFXANKO14593 260 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 ANGPT2O15123 496 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 SEC24DO94855 1032 aaPredicted RBP9.68□□□□□ -0.86
CCDC47-203ENST00000580986 SERPINA7P05543 415 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 HOXB9P17482 250 aaPredicted RBP9.68□□□□□ -0.86
CCDC47-203ENST00000580986 TNNI3P19429 210 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 PTPN6P29350 595 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 CLCN2P51788 898 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 DGKQP52824 942 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 SLC37A1P57057 533 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 EEF1A2Q05639 463 aaKnown RBP9.68□□□□□ -0.86
CCDC47-203ENST00000580986 VAC14Q08AM6 782 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 SF3A3Q12874 501 aaKnown RBP eCLIP9.68□□□□□ -0.86
CCDC47-203ENST00000580986 HSPB3Q12988 150 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 CHAF1BQ13112 559 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 SRSF6Q13247 344 aaKnown RBP9.68□□□□□ -0.86
CCDC47-203ENST00000580986 CYLC2Q14093 348 aaPredicted RBP9.68□□□□□ -0.86
CCDC47-203ENST00000580986 KRT72Q14CN4 511 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 FAAH2Q6GMR7 532 aa9.68□□□□□ -0.86
CCDC47-203ENST00000580986 H3F3CQ6NXT2 135 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms