RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 PRMT3O60678 531 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 CCNB2O95067 398 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 CRYZL1O95825 349 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 CCNYL3P0C7X3 344 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 CCT3P49368 545 aaKnown RBP8.09□□□□□ -1.11
RPAIN-215ENST00000575112 BLVRAP53004 296 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 TUBA1BP68363 451 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.09□□□□□ -1.11
RPAIN-215ENST00000575112 DCST1Q5T197 706 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 SIGIRRQ6IA17 410 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 TMEM107Q6UX40 140 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 TUBA1AQ71U36 451 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 CBLL1Q75N03 491 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 YIPF7Q8N8F6 280 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 OVCA2Q8WZ82 227 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 DCLRE1CQ96SD1 692 aaKnown RBP8.09□□□□□ -1.11
RPAIN-215ENST00000575112 PITX2Q99697 317 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 HDHD5Q9BXW7 423 aa8.09□□□□□ -1.11
RPAIN-215ENST00000575112 TEX10Q9NXF1 929 aaPredicted RBP8.09□□□□□ -1.11
RPAIN-215ENST00000575112 H2AFY2Q9P0M6 372 aaPredicted RBP8.09□□□□□ -1.11
RPAIN-215ENST00000575112 NDRG2Q9UN36 371 aaKnown RBP8.09□□□□□ -1.11
RPAIN-215ENST00000575112 MYL12BO14950 172 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 ENTPD6O75354 484 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 NCR1O76036 304 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 HBQ1P09105 142 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 ADRB3P13945 408 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 PPP2R1BP30154 601 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 UQCRC1P31930 480 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 IL12RB1P42701 662 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 ASMTP46597 345 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 SIM1P81133 766 aaPredicted RBP8.08□□□□□ -1.12
RPAIN-215ENST00000575112 TAP2Q03519 686 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 P2RY14Q15391 338 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 DEFB110Q30KQ9 67 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 SLC7A6Q92536 515 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 USP7Q93009 1102 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 REPS1Q96D71 796 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 MTERF3Q96E29 417 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 C16orf58Q96GQ5 468 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 TMEM19Q96HH6 336 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 RPP25Q9BUL9 199 aaKnown RBP8.08□□□□□ -1.12
RPAIN-215ENST00000575112 OR51V1Q9H2C8 321 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 MIXL1Q9H2W2 232 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 SNX7Q9UNH6 387 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 ENTPD4Q9Y227 616 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 PCYT1BQ9Y5K3 369 aaPredicted RBP8.08□□□□□ -1.12
RPAIN-215ENST00000575112 A0A1W2PS29 197 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 HNRNPCL2B2RXH8 293 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 H7C0S8 307 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 SLC9A3R1O14745 358 aaPredicted RBP8.08□□□□□ -1.12
RPAIN-215ENST00000575112 PLA2G10O15496 165 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 PDPK1O15530 556 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 C1orf105O95561 183 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 GASTP01350 101 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 CSF3P09919 207 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 TSPAN19P0C672 248 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 PVRP15151 417 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 NPPBP16860 134 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 ENDOUP21128 410 aaKnown RBP8.08□□□□□ -1.12
RPAIN-215ENST00000575112 APEX1P27695 318 aaKnown RBP8.08□□□□□ -1.12
RPAIN-215ENST00000575112 CD79BP40259 229 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 CENPAP49450 140 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 ITGA1P56199 1179 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 TAS2R41P59536 307 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 CHRNEQ04844 493 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 DEFB134Q4QY38 66 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 YIF1BQ5BJH7 314 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 WDR45BQ5MNZ6 344 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 PLEKHS1Q5SXH7 462 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 CCNJQ5T5M9 372 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 TANGO2Q6ICL3 276 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 FAM92BQ6ZTR7 304 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 C6orf120Q7Z4R8 191 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 NOXA1Q86UR1 476 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 RAB42Q8N4Z0 105 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 BBS10Q8TAM1 723 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 LCN9Q8WX39 176 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 FGF13Q92913 245 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 TIFAQ96CG3 184 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 GAL3ST1Q99999 423 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 UCK2Q9BZX2 261 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 POLR2J2Q9GZM3 115 aaKnown RBP8.08□□□□□ -1.12
RPAIN-215ENST00000575112 DPEP2Q9H4A9 486 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 NARFLQ9H6Q4 476 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 MBNL1Q9NR56 388 aaKnown RBP8.08□□□□□ -1.12
RPAIN-215ENST00000575112 CLN6Q9NWW5 311 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 CNIH4Q9P003 139 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 COMMD3Q9UBI1 195 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 CIB4A0PJX0 185 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 B4DXG7 233 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 C1QTNF3-AMACRE9PGA6 284 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 PI15O43692 258 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 SEMA7AO75326 666 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 UGT2B17O75795 530 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 ACADMP11310 421 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 NOS3P29474 1203 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 LINC00299Q6ZSB3 139 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 RAB43Q86YS6 212 aa8.08□□□□□ -1.12
RPAIN-215ENST00000575112 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.08□□□□□ -1.12
RPAIN-215ENST00000575112 PPP1R16AQ96I34 528 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms